Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RC3H1Q5TC82 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RC3H1Q5TC82 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RC3H1Q5TC82 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RC3H1Q5TC82 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC24.79■■□□□ 1.56
RC3H1Q5TC82 AL450487.1-201ENST00000426799 995 ntBASIC24.79■■□□□ 1.56
RC3H1Q5TC82 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RC3H1Q5TC82 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RC3H1Q5TC82 AL136038.3-201ENST00000561909 1096 ntBASIC24.79■■□□□ 1.56
RC3H1Q5TC82 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RC3H1Q5TC82 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 CD81-212ENST00000526072 1172 ntTSL 5 BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 AC093458.2-201ENST00000623150 629 ntBASIC24.78■■□□□ 1.56
RC3H1Q5TC82 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
RC3H1Q5TC82 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RC3H1Q5TC82 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
RC3H1Q5TC82 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RC3H1Q5TC82 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RC3H1Q5TC82 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RC3H1Q5TC82 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
RC3H1Q5TC82 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC24.77■■□□□ 1.56
RC3H1Q5TC82 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC24.77■■□□□ 1.56
RC3H1Q5TC82 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC24.77■■□□□ 1.56
RC3H1Q5TC82 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RC3H1Q5TC82 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
RC3H1Q5TC82 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
RC3H1Q5TC82 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC24.76■■□□□ 1.55
RC3H1Q5TC82 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
RC3H1Q5TC82 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RC3H1Q5TC82 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RC3H1Q5TC82 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
RC3H1Q5TC82 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RC3H1Q5TC82 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
RC3H1Q5TC82 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RC3H1Q5TC82 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC24.76■■□□□ 1.55
RC3H1Q5TC82 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
RC3H1Q5TC82 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RC3H1Q5TC82 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC24.76■■□□□ 1.55
RC3H1Q5TC82 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RC3H1Q5TC82 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RC3H1Q5TC82 KRT8P41-201ENST00000533985 1514 ntBASIC24.76■■□□□ 1.55
RC3H1Q5TC82 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RC3H1Q5TC82 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 DFFB-212ENST00000625756 649 ntTSL 5 BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 KRT8P45-201ENST00000414328 1447 ntBASIC24.75■■□□□ 1.55
RC3H1Q5TC82 EP400NL-214ENST00000641289 2402 ntBASIC24.75■■□□□ 1.55
RC3H1Q5TC82 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 AF106564.1-201ENST00000607058 2553 ntBASIC24.75■■□□□ 1.55
RC3H1Q5TC82 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC24.75■■□□□ 1.55
RC3H1Q5TC82 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
RC3H1Q5TC82 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RC3H1Q5TC82 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RC3H1Q5TC82 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RC3H1Q5TC82 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RC3H1Q5TC82 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RC3H1Q5TC82 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC24.74■■□□□ 1.55
RC3H1Q5TC82 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RC3H1Q5TC82 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC24.74■■□□□ 1.55
RC3H1Q5TC82 AC026396.1-201ENST00000419388 421 ntBASIC24.74■■□□□ 1.55
RC3H1Q5TC82 HCG4P8-203ENST00000443049 980 ntBASIC24.74■■□□□ 1.55
RC3H1Q5TC82 SNX5-210ENST00000481323 562 ntTSL 3 BASIC24.74■■□□□ 1.55
RC3H1Q5TC82 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC24.74■■□□□ 1.55
RC3H1Q5TC82 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RC3H1Q5TC82 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
RC3H1Q5TC82 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
RC3H1Q5TC82 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms