Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 AC098590.1-201ENST00000468126 897 ntBASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC01556Q5JQF7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 UBE2SP1-201ENST00000450587 669 ntBASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LINC01556Q5JQF7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 AL353807.1-201ENST00000427475 662 ntBASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 AL158047.1-201ENST00000445918 881 ntBASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.3□□□□□ -0.28
LINC01556Q5JQF7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms