Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC9.82□□□□□ -0.84
LINC01554Q52M75 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC9.82□□□□□ -0.84
LINC01554Q52M75 ME2-206ENST00000638410 2289 ntTSL 5 BASIC9.82□□□□□ -0.84
LINC01554Q52M75 ME2-210ENST00000639255 2262 ntTSL 5 BASIC9.82□□□□□ -0.84
LINC01554Q52M75 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC9.82□□□□□ -0.84
LINC01554Q52M75 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC01554Q52M75 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 AC010542.4-201ENST00000563151 1910 ntBASIC9.82□□□□□ -0.84
LINC01554Q52M75 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC01554Q52M75 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
LINC01554Q52M75 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC9.82□□□□□ -0.84
LINC01554Q52M75 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC9.82□□□□□ -0.84
LINC01554Q52M75 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC9.82□□□□□ -0.84
LINC01554Q52M75 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC9.82□□□□□ -0.84
LINC01554Q52M75 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC9.82□□□□□ -0.84
LINC01554Q52M75 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC9.82□□□□□ -0.84
LINC01554Q52M75 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
LINC01554Q52M75 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
LINC01554Q52M75 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC01554Q52M75 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC01554Q52M75 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC01554Q52M75 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01554Q52M75 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 CLTA-210ENST00000540080 989 ntTSL 2 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 AC012354.3-201ENST00000623734 483 ntBASIC9.81□□□□□ -0.84
LINC01554Q52M75 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC9.81□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms