Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RFTN2Q52LD8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.83■□□□□ 0.61
RFTN2Q52LD8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.83■□□□□ 0.61
RFTN2Q52LD8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFTN2Q52LD8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RFTN2Q52LD8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFTN2Q52LD8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFTN2Q52LD8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.83■□□□□ 0.6
RFTN2Q52LD8 BX276092.2-201ENST00000417668 665 ntBASIC18.83■□□□□ 0.6
RFTN2Q52LD8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.83■□□□□ 0.6
RFTN2Q52LD8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RFTN2Q52LD8 AC116351.2-201ENST00000606540 1585 ntBASIC18.83■□□□□ 0.6
RFTN2Q52LD8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
RFTN2Q52LD8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFTN2Q52LD8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
RFTN2Q52LD8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFTN2Q52LD8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.83■□□□□ 0.6
RFTN2Q52LD8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RFTN2Q52LD8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.82■□□□□ 0.6
RFTN2Q52LD8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
RFTN2Q52LD8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFTN2Q52LD8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.81■□□□□ 0.6
RFTN2Q52LD8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFTN2Q52LD8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.81■□□□□ 0.6
RFTN2Q52LD8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RFTN2Q52LD8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFTN2Q52LD8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.81■□□□□ 0.6
RFTN2Q52LD8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RFTN2Q52LD8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFTN2Q52LD8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.81■□□□□ 0.6
RFTN2Q52LD8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFTN2Q52LD8 AC026185.1-201ENST00000445748 174 ntBASIC18.81■□□□□ 0.6
RFTN2Q52LD8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFTN2Q52LD8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFTN2Q52LD8 RAP2CP1-201ENST00000605103 478 ntBASIC18.81■□□□□ 0.6
RFTN2Q52LD8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFTN2Q52LD8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFTN2Q52LD8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.8■□□□□ 0.6
RFTN2Q52LD8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFTN2Q52LD8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFTN2Q52LD8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RFTN2Q52LD8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFTN2Q52LD8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFTN2Q52LD8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
RFTN2Q52LD8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.8■□□□□ 0.6
RFTN2Q52LD8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RFTN2Q52LD8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFTN2Q52LD8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RFTN2Q52LD8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RFTN2Q52LD8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.8■□□□□ 0.6
RFTN2Q52LD8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
RFTN2Q52LD8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFTN2Q52LD8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.8■□□□□ 0.6
RFTN2Q52LD8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.8■□□□□ 0.6
RFTN2Q52LD8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 MIR663A-201ENST00000385250 93 ntBASIC18.79■□□□□ 0.6
RFTN2Q52LD8 CROCCP5-201ENST00000436658 830 ntBASIC18.79■□□□□ 0.6
RFTN2Q52LD8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 AL137784.2-201ENST00000607332 1000 ntBASIC18.79■□□□□ 0.6
RFTN2Q52LD8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RFTN2Q52LD8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms