Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 CNN2P6-201ENST00000439038 900 ntBASIC17.31■□□□□ 0.36
ODF4Q2M2E3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 DUX4L16-201ENST00000555130 1264 ntBASIC17.31■□□□□ 0.36
ODF4Q2M2E3 MIR6821-201ENST00000617625 74 ntBASIC17.31■□□□□ 0.36
ODF4Q2M2E3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 Z82202.1-201ENST00000623446 1880 ntBASIC17.31■□□□□ 0.36
ODF4Q2M2E3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 AL032819.2-201ENST00000624543 2162 ntBASIC17.3■□□□□ 0.36
ODF4Q2M2E3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF4Q2M2E3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ODF4Q2M2E3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 CYP2T1P-201ENST00000432607 1285 ntBASIC17.28■□□□□ 0.36
ODF4Q2M2E3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 AC100791.3-201ENST00000617619 330 ntBASIC17.28■□□□□ 0.36
ODF4Q2M2E3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 AC008694.1-202ENST00000636953 945 ntBASIC17.28■□□□□ 0.36
ODF4Q2M2E3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 AP001271.2-201ENST00000624018 1556 ntBASIC17.28■□□□□ 0.36
ODF4Q2M2E3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ODF4Q2M2E3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ODF4Q2M2E3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms