Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.84■□□□□ 0.45
CXCR4P61073 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.84■□□□□ 0.45
CXCR4P61073 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CXCR4P61073 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CXCR4P61073 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CXCR4P61073 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.84■□□□□ 0.45
CXCR4P61073 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CXCR4P61073 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CXCR4P61073 AC093525.10-201ENST00000625130 1569 ntBASIC17.83■□□□□ 0.45
CXCR4P61073 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CXCR4P61073 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CXCR4P61073 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CXCR4P61073 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
CXCR4P61073 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CXCR4P61073 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CXCR4P61073 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CXCR4P61073 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CXCR4P61073 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CXCR4P61073 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CXCR4P61073 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CXCR4P61073 YBX1P1-201ENST00000445822 960 ntBASIC17.83■□□□□ 0.44
CXCR4P61073 CDV3P1-201ENST00000471403 739 ntBASIC17.83■□□□□ 0.44
CXCR4P61073 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CXCR4P61073 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.83■□□□□ 0.44
CXCR4P61073 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.83■□□□□ 0.44
CXCR4P61073 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.83■□□□□ 0.44
CXCR4P61073 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CXCR4P61073 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.83■□□□□ 0.44
CXCR4P61073 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CXCR4P61073 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CXCR4P61073 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.83■□□□□ 0.44
CXCR4P61073 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.83■□□□□ 0.44
CXCR4P61073 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CXCR4P61073 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CXCR4P61073 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CXCR4P61073 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CXCR4P61073 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CXCR4P61073 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CXCR4P61073 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CXCR4P61073 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.82■□□□□ 0.44
CXCR4P61073 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.82■□□□□ 0.44
CXCR4P61073 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CXCR4P61073 PCDHB18P-201ENST00000524813 2368 ntBASIC17.82■□□□□ 0.44
CXCR4P61073 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CXCR4P61073 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.82■□□□□ 0.44
CXCR4P61073 AL354751.1-201ENST00000412768 1863 ntBASIC17.82■□□□□ 0.44
CXCR4P61073 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.82■□□□□ 0.44
CXCR4P61073 NOC2LP1-202ENST00000452600 2235 ntBASIC17.82■□□□□ 0.44
CXCR4P61073 Z98044.1-201ENST00000632503 1764 ntBASIC17.82■□□□□ 0.44
CXCR4P61073 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CXCR4P61073 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CXCR4P61073 AC019069.1-201ENST00000610008 1333 ntBASIC17.82■□□□□ 0.44
CXCR4P61073 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CXCR4P61073 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CXCR4P61073 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CXCR4P61073 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.82■□□□□ 0.44
CXCR4P61073 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.82■□□□□ 0.44
CXCR4P61073 KRT18P14-201ENST00000534205 1250 ntBASIC17.82■□□□□ 0.44
CXCR4P61073 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.82■□□□□ 0.44
CXCR4P61073 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CXCR4P61073 AL356652.1-201ENST00000615962 565 ntBASIC17.82■□□□□ 0.44
CXCR4P61073 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CXCR4P61073 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
CXCR4P61073 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CXCR4P61073 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.82■□□□□ 0.44
CXCR4P61073 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.82■□□□□ 0.44
CXCR4P61073 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CXCR4P61073 WIZP1-201ENST00000531444 2299 ntBASIC17.82■□□□□ 0.44
CXCR4P61073 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CXCR4P61073 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.82■□□□□ 0.44
CXCR4P61073 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CXCR4P61073 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.81■□□□□ 0.44
CXCR4P61073 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CXCR4P61073 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CXCR4P61073 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CXCR4P61073 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CXCR4P61073 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CXCR4P61073 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CXCR4P61073 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.81■□□□□ 0.44
CXCR4P61073 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CXCR4P61073 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.81■□□□□ 0.44
CXCR4P61073 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CXCR4P61073 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CXCR4P61073 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.81■□□□□ 0.44
CXCR4P61073 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CXCR4P61073 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CXCR4P61073 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CXCR4P61073 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CXCR4P61073 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CXCR4P61073 AC141586.3-201ENST00000562166 1838 ntBASIC17.81■□□□□ 0.44
CXCR4P61073 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.81■□□□□ 0.44
CXCR4P61073 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CXCR4P61073 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CXCR4P61073 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CXCR4P61073 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CXCR4P61073 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CXCR4P61073 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CXCR4P61073 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CXCR4P61073 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CXCR4P61073 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms