Protein–RNA interactions for Protein: P57682

KLF3, Krueppel-like factor 3, humanhuman

Predicted RBP Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3P57682 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.83■□□□□ 0.28
KLF3P57682 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLF3P57682 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
KLF3P57682 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
KLF3P57682 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
KLF3P57682 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.82■□□□□ 0.28
KLF3P57682 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
KLF3P57682 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.82■□□□□ 0.28
KLF3P57682 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.82■□□□□ 0.28
KLF3P57682 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.82■□□□□ 0.28
KLF3P57682 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.82■□□□□ 0.28
KLF3P57682 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.82■□□□□ 0.28
KLF3P57682 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.82■□□□□ 0.28
KLF3P57682 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.82■□□□□ 0.28
KLF3P57682 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.82■□□□□ 0.28
KLF3P57682 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.82■□□□□ 0.28
KLF3P57682 AC093827.2-201ENST00000512654 315 ntBASIC16.82■□□□□ 0.28
KLF3P57682 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.82■□□□□ 0.28
KLF3P57682 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.82■□□□□ 0.28
KLF3P57682 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.82■□□□□ 0.28
KLF3P57682 RARRES2P10-201ENST00000564312 460 ntBASIC16.82■□□□□ 0.28
KLF3P57682 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.82■□□□□ 0.28
KLF3P57682 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.82■□□□□ 0.28
KLF3P57682 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.82■□□□□ 0.28
KLF3P57682 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.82■□□□□ 0.28
KLF3P57682 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
KLF3P57682 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KLF3P57682 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.82■□□□□ 0.28
KLF3P57682 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KLF3P57682 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.81■□□□□ 0.28
KLF3P57682 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLF3P57682 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
KLF3P57682 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KLF3P57682 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
KLF3P57682 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.81■□□□□ 0.28
KLF3P57682 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.81■□□□□ 0.28
KLF3P57682 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLF3P57682 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KLF3P57682 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KLF3P57682 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLF3P57682 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLF3P57682 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLF3P57682 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
KLF3P57682 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KLF3P57682 TUBB8P6-201ENST00000436895 1288 ntBASIC16.81■□□□□ 0.28
KLF3P57682 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KLF3P57682 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KLF3P57682 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.81■□□□□ 0.28
KLF3P57682 AC008550.1-201ENST00000511500 884 ntBASIC16.81■□□□□ 0.28
KLF3P57682 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KLF3P57682 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.81■□□□□ 0.28
KLF3P57682 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.81■□□□□ 0.28
KLF3P57682 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.81■□□□□ 0.28
KLF3P57682 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLF3P57682 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.81■□□□□ 0.28
KLF3P57682 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.81■□□□□ 0.28
KLF3P57682 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLF3P57682 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.8■□□□□ 0.28
KLF3P57682 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.8■□□□□ 0.28
KLF3P57682 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KLF3P57682 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLF3P57682 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.8■□□□□ 0.28
KLF3P57682 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLF3P57682 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLF3P57682 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KLF3P57682 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KLF3P57682 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.8■□□□□ 0.28
KLF3P57682 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.8■□□□□ 0.28
KLF3P57682 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KLF3P57682 AL353807.1-201ENST00000427475 662 ntBASIC16.8■□□□□ 0.28
KLF3P57682 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KLF3P57682 KRT18P16-201ENST00000510337 1294 ntBASIC16.8■□□□□ 0.28
KLF3P57682 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KLF3P57682 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.8■□□□□ 0.28
KLF3P57682 AC112907.3-201ENST00000577781 2400 ntBASIC16.8■□□□□ 0.28
KLF3P57682 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
KLF3P57682 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms