Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH13P55290 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH13P55290 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.14■□□□□ 0.66
CDH13P55290 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDH13P55290 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDH13P55290 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CDH13P55290 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH13P55290 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH13P55290 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH13P55290 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH13P55290 MIR663A-201ENST00000385250 93 ntBASIC19.14■□□□□ 0.65
CDH13P55290 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
CDH13P55290 AC026185.1-201ENST00000445748 174 ntBASIC19.14■□□□□ 0.65
CDH13P55290 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH13P55290 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH13P55290 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH13P55290 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.14■□□□□ 0.65
CDH13P55290 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH13P55290 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.14■□□□□ 0.65
CDH13P55290 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CDH13P55290 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH13P55290 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH13P55290 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH13P55290 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH13P55290 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH13P55290 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH13P55290 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CDH13P55290 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH13P55290 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH13P55290 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH13P55290 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH13P55290 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH13P55290 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.13■□□□□ 0.65
CDH13P55290 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.13■□□□□ 0.65
CDH13P55290 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH13P55290 AL137784.2-201ENST00000607332 1000 ntBASIC19.13■□□□□ 0.65
CDH13P55290 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH13P55290 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH13P55290 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH13P55290 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH13P55290 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH13P55290 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH13P55290 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH13P55290 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH13P55290 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH13P55290 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH13P55290 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH13P55290 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH13P55290 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
CDH13P55290 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CDH13P55290 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH13P55290 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH13P55290 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CDH13P55290 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH13P55290 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH13P55290 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH13P55290 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH13P55290 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.12■□□□□ 0.65
CDH13P55290 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH13P55290 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH13P55290 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH13P55290 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH13P55290 CROCCP5-201ENST00000436658 830 ntBASIC19.12■□□□□ 0.65
CDH13P55290 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.12■□□□□ 0.65
CDH13P55290 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH13P55290 RAP2CP1-201ENST00000605103 478 ntBASIC19.12■□□□□ 0.65
CDH13P55290 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH13P55290 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH13P55290 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH13P55290 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CDH13P55290 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH13P55290 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH13P55290 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH13P55290 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH13P55290 AC116351.2-201ENST00000606540 1585 ntBASIC19.11■□□□□ 0.65
CDH13P55290 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CDH13P55290 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH13P55290 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH13P55290 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH13P55290 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH13P55290 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH13P55290 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH13P55290 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH13P55290 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.11■□□□□ 0.65
CDH13P55290 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH13P55290 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH13P55290 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH13P55290 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.11■□□□□ 0.65
CDH13P55290 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.11■□□□□ 0.65
CDH13P55290 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH13P55290 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH13P55290 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH13P55290 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH13P55290 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH13P55290 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CDH13P55290 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH13P55290 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH13P55290 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH13P55290 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH13P55290 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms