Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 AC004264.1-201ENST00000608354 794 ntBASIC20.94■□□□□ 0.94
CDH8P55286 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.94■□□□□ 0.94
CDH8P55286 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CDH8P55286 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
CDH8P55286 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH8P55286 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.94■□□□□ 0.94
CDH8P55286 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDH8P55286 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.94■□□□□ 0.94
CDH8P55286 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH8P55286 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH8P55286 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH8P55286 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH8P55286 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.93■□□□□ 0.94
CDH8P55286 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH8P55286 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CDH8P55286 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.93■□□□□ 0.94
CDH8P55286 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDH8P55286 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH8P55286 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.93■□□□□ 0.94
CDH8P55286 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH8P55286 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CDH8P55286 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH8P55286 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.93■□□□□ 0.94
CDH8P55286 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CDH8P55286 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CDH8P55286 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH8P55286 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH8P55286 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH8P55286 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.92■□□□□ 0.94
CDH8P55286 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDH8P55286 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH8P55286 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDH8P55286 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH8P55286 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
CDH8P55286 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH8P55286 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.92■□□□□ 0.94
CDH8P55286 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.92■□□□□ 0.94
CDH8P55286 TUBB8P6-201ENST00000436895 1288 ntBASIC20.92■□□□□ 0.94
CDH8P55286 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH8P55286 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CDH8P55286 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.92■□□□□ 0.94
CDH8P55286 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.92■□□□□ 0.94
CDH8P55286 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDH8P55286 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.92■□□□□ 0.94
CDH8P55286 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH8P55286 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH8P55286 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDH8P55286 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.92■□□□□ 0.94
CDH8P55286 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CDH8P55286 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.91■□□□□ 0.94
CDH8P55286 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.91■□□□□ 0.94
CDH8P55286 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDH8P55286 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.91■□□□□ 0.94
CDH8P55286 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH8P55286 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.91■□□□□ 0.94
CDH8P55286 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CDH8P55286 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CDH8P55286 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.91■□□□□ 0.94
CDH8P55286 Z99916.2-201ENST00000604037 246 ntBASIC20.91■□□□□ 0.94
CDH8P55286 AL158211.5-201ENST00000623583 2518 ntBASIC20.91■□□□□ 0.94
CDH8P55286 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CDH8P55286 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH8P55286 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH8P55286 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CDH8P55286 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH8P55286 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH8P55286 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH8P55286 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH8P55286 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH8P55286 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH8P55286 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH8P55286 HTR7P1-201ENST00000538670 1336 ntBASIC20.9■□□□□ 0.94
CDH8P55286 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH8P55286 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.9■□□□□ 0.94
CDH8P55286 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CDH8P55286 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH8P55286 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CDH8P55286 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH8P55286 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH8P55286 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.9■□□□□ 0.94
CDH8P55286 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.9■□□□□ 0.94
CDH8P55286 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH8P55286 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.9■□□□□ 0.94
CDH8P55286 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH8P55286 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.9■□□□□ 0.94
CDH8P55286 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH8P55286 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH8P55286 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.89■□□□□ 0.94
CDH8P55286 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDH8P55286 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CDH8P55286 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CDH8P55286 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH8P55286 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH8P55286 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH8P55286 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.89■□□□□ 0.93
CDH8P55286 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH8P55286 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CDH8P55286 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH8P55286 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH8P55286 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms