Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.23■□□□□ 0.51
PSMD4P55036 CD99P1-205ENST00000527459 561 ntBASIC18.23■□□□□ 0.51
PSMD4P55036 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.23■□□□□ 0.51
PSMD4P55036 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PSMD4P55036 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PSMD4P55036 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PSMD4P55036 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PSMD4P55036 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.23■□□□□ 0.51
PSMD4P55036 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PSMD4P55036 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PSMD4P55036 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PSMD4P55036 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
PSMD4P55036 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
PSMD4P55036 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PSMD4P55036 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PSMD4P55036 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.22■□□□□ 0.51
PSMD4P55036 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PSMD4P55036 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PSMD4P55036 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PSMD4P55036 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PSMD4P55036 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.22■□□□□ 0.51
PSMD4P55036 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PSMD4P55036 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PSMD4P55036 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.22■□□□□ 0.51
PSMD4P55036 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PSMD4P55036 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PSMD4P55036 POM121L13P-201ENST00000422362 380 ntBASIC18.22■□□□□ 0.51
PSMD4P55036 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
PSMD4P55036 AC026366.1-201ENST00000488803 879 ntBASIC18.22■□□□□ 0.51
PSMD4P55036 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PSMD4P55036 AL121829.2-201ENST00000620908 328 ntBASIC18.22■□□□□ 0.51
PSMD4P55036 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PSMD4P55036 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.22■□□□□ 0.51
PSMD4P55036 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PSMD4P55036 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.22■□□□□ 0.51
PSMD4P55036 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.22■□□□□ 0.51
PSMD4P55036 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PSMD4P55036 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.22■□□□□ 0.51
PSMD4P55036 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
PSMD4P55036 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PSMD4P55036 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PSMD4P55036 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.21■□□□□ 0.51
PSMD4P55036 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.21■□□□□ 0.51
PSMD4P55036 AFG3L1P-217ENST00000557444 2447 ntBASIC18.21■□□□□ 0.51
PSMD4P55036 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.21■□□□□ 0.51
PSMD4P55036 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PSMD4P55036 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PSMD4P55036 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PSMD4P55036 PRKY-204ENST00000533551 1019 ntBASIC18.21■□□□□ 0.51
PSMD4P55036 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PSMD4P55036 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PSMD4P55036 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.21■□□□□ 0.51
PSMD4P55036 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PSMD4P55036 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PSMD4P55036 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PSMD4P55036 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.21■□□□□ 0.51
PSMD4P55036 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PSMD4P55036 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.21■□□□□ 0.5
PSMD4P55036 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PSMD4P55036 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PSMD4P55036 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PSMD4P55036 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PSMD4P55036 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PSMD4P55036 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PSMD4P55036 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PSMD4P55036 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PSMD4P55036 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.2■□□□□ 0.5
PSMD4P55036 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.2■□□□□ 0.5
PSMD4P55036 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PSMD4P55036 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PSMD4P55036 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PSMD4P55036 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PSMD4P55036 TFP1-202ENST00000475455 1573 ntBASIC18.2■□□□□ 0.5
PSMD4P55036 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.2■□□□□ 0.5
PSMD4P55036 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.2■□□□□ 0.5
PSMD4P55036 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.2■□□□□ 0.5
PSMD4P55036 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PSMD4P55036 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PSMD4P55036 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.2■□□□□ 0.5
PSMD4P55036 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.2■□□□□ 0.5
PSMD4P55036 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PSMD4P55036 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PSMD4P55036 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PSMD4P55036 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.19■□□□□ 0.5
PSMD4P55036 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PSMD4P55036 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PSMD4P55036 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PSMD4P55036 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PSMD4P55036 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.19■□□□□ 0.5
PSMD4P55036 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PSMD4P55036 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PSMD4P55036 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.19■□□□□ 0.5
PSMD4P55036 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PSMD4P55036 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PSMD4P55036 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PSMD4P55036 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
PSMD4P55036 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PSMD4P55036 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.19■□□□□ 0.5
PSMD4P55036 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.19■□□□□ 0.5
PSMD4P55036 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms