Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 AC005837.3-201ENST00000612163 286 ntBASIC19.44■□□□□ 0.7
CLNS1AP54105 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLNS1AP54105 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLNS1AP54105 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLNS1AP54105 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLNS1AP54105 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLNS1AP54105 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLNS1AP54105 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.44■□□□□ 0.7
CLNS1AP54105 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
CLNS1AP54105 AL390961.4-201ENST00000623958 2535 ntBASIC19.44■□□□□ 0.7
CLNS1AP54105 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CLNS1AP54105 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLNS1AP54105 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CLNS1AP54105 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.43■□□□□ 0.7
CLNS1AP54105 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLNS1AP54105 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLNS1AP54105 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLNS1AP54105 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CLNS1AP54105 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLNS1AP54105 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLNS1AP54105 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
CLNS1AP54105 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLNS1AP54105 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.43■□□□□ 0.7
CLNS1AP54105 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.43■□□□□ 0.7
CLNS1AP54105 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.43■□□□□ 0.7
CLNS1AP54105 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.43■□□□□ 0.7
CLNS1AP54105 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLNS1AP54105 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CLNS1AP54105 AC123595.1-201ENST00000440769 1046 ntBASIC19.43■□□□□ 0.7
CLNS1AP54105 SLC7A5P2-201ENST00000553010 536 ntBASIC19.43■□□□□ 0.7
CLNS1AP54105 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.43■□□□□ 0.7
CLNS1AP54105 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLNS1AP54105 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.43■□□□□ 0.7
CLNS1AP54105 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLNS1AP54105 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.43■□□□□ 0.7
CLNS1AP54105 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.43■□□□□ 0.7
CLNS1AP54105 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.43■□□□□ 0.7
CLNS1AP54105 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CLNS1AP54105 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLNS1AP54105 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLNS1AP54105 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.42■□□□□ 0.7
CLNS1AP54105 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLNS1AP54105 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLNS1AP54105 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLNS1AP54105 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLNS1AP54105 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.42■□□□□ 0.7
CLNS1AP54105 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLNS1AP54105 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLNS1AP54105 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CLNS1AP54105 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.42■□□□□ 0.7
CLNS1AP54105 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CLNS1AP54105 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.42■□□□□ 0.7
CLNS1AP54105 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLNS1AP54105 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLNS1AP54105 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLNS1AP54105 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLNS1AP54105 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CLNS1AP54105 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.42■□□□□ 0.7
CLNS1AP54105 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLNS1AP54105 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.42■□□□□ 0.7
CLNS1AP54105 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.41■□□□□ 0.7
CLNS1AP54105 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLNS1AP54105 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLNS1AP54105 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CLNS1AP54105 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLNS1AP54105 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLNS1AP54105 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLNS1AP54105 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CLNS1AP54105 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLNS1AP54105 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLNS1AP54105 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CLNS1AP54105 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CLNS1AP54105 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CLNS1AP54105 AC243732.1-201ENST00000612648 864 ntBASIC19.41■□□□□ 0.7
CLNS1AP54105 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.41■□□□□ 0.7
CLNS1AP54105 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLNS1AP54105 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLNS1AP54105 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CLNS1AP54105 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.41■□□□□ 0.7
CLNS1AP54105 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.41■□□□□ 0.7
CLNS1AP54105 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLNS1AP54105 AC139713.2-201ENST00000641328 2723 ntBASIC19.41■□□□□ 0.7
CLNS1AP54105 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLNS1AP54105 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.41■□□□□ 0.7
CLNS1AP54105 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.41■□□□□ 0.7
CLNS1AP54105 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLNS1AP54105 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLNS1AP54105 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.41■□□□□ 0.7
CLNS1AP54105 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLNS1AP54105 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLNS1AP54105 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
CLNS1AP54105 AC099398.1-201ENST00000567919 2776 ntBASIC19.4■□□□□ 0.7
CLNS1AP54105 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLNS1AP54105 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
CLNS1AP54105 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLNS1AP54105 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.4■□□□□ 0.7
CLNS1AP54105 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLNS1AP54105 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLNS1AP54105 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLNS1AP54105 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms