Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.72■□□□□ 0.59
POLR2JP52435 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
POLR2JP52435 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.72■□□□□ 0.59
POLR2JP52435 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.72■□□□□ 0.59
POLR2JP52435 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
POLR2JP52435 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.72■□□□□ 0.59
POLR2JP52435 AC016769.1-201ENST00000409132 1010 ntBASIC18.72■□□□□ 0.59
POLR2JP52435 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.72■□□□□ 0.59
POLR2JP52435 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.72■□□□□ 0.59
POLR2JP52435 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
POLR2JP52435 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
POLR2JP52435 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.72■□□□□ 0.59
POLR2JP52435 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.72■□□□□ 0.59
POLR2JP52435 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2JP52435 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2JP52435 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
POLR2JP52435 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.71■□□□□ 0.59
POLR2JP52435 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2JP52435 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2JP52435 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
POLR2JP52435 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2JP52435 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
POLR2JP52435 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2JP52435 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2JP52435 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2JP52435 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2JP52435 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.71■□□□□ 0.59
POLR2JP52435 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR2JP52435 AC011767.1-201ENST00000617410 1153 ntBASIC18.71■□□□□ 0.59
POLR2JP52435 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.71■□□□□ 0.59
POLR2JP52435 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2JP52435 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2JP52435 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2JP52435 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
POLR2JP52435 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2JP52435 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.7■□□□□ 0.58
POLR2JP52435 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.7■□□□□ 0.58
POLR2JP52435 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2JP52435 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2JP52435 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2JP52435 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
POLR2JP52435 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2JP52435 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2JP52435 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2JP52435 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2JP52435 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2JP52435 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.7■□□□□ 0.58
POLR2JP52435 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2JP52435 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.7■□□□□ 0.58
POLR2JP52435 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.7■□□□□ 0.58
POLR2JP52435 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
POLR2JP52435 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2JP52435 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2JP52435 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2JP52435 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2JP52435 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.7■□□□□ 0.58
POLR2JP52435 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
POLR2JP52435 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2JP52435 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2JP52435 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2JP52435 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
POLR2JP52435 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2JP52435 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.69■□□□□ 0.58
POLR2JP52435 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2JP52435 AC010980.2-201ENST00000587099 1412 ntBASIC18.69■□□□□ 0.58
POLR2JP52435 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2JP52435 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2JP52435 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
POLR2JP52435 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.69■□□□□ 0.58
POLR2JP52435 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.69■□□□□ 0.58
POLR2JP52435 AC087623.3-201ENST00000607047 1098 ntBASIC18.69■□□□□ 0.58
POLR2JP52435 MIR6821-201ENST00000617625 74 ntBASIC18.69■□□□□ 0.58
POLR2JP52435 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.69■□□□□ 0.58
POLR2JP52435 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2JP52435 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2JP52435 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2JP52435 AC018553.1-201ENST00000616682 1458 ntBASIC18.69■□□□□ 0.58
POLR2JP52435 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms