Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEK4P51957 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.32■■□□□ 1.32
NEK4P51957 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK4P51957 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NEK4P51957 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK4P51957 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC23.31■■□□□ 1.32
NEK4P51957 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK4P51957 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.31■■□□□ 1.32
NEK4P51957 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK4P51957 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.31■■□□□ 1.32
NEK4P51957 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.31■■□□□ 1.32
NEK4P51957 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
NEK4P51957 CROCCP5-201ENST00000436658 830 ntBASIC23.31■■□□□ 1.32
NEK4P51957 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NEK4P51957 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.31■■□□□ 1.32
NEK4P51957 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.31■■□□□ 1.32
NEK4P51957 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.31■■□□□ 1.32
NEK4P51957 AL137784.2-201ENST00000607332 1000 ntBASIC23.31■■□□□ 1.32
NEK4P51957 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.31■■□□□ 1.32
NEK4P51957 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK4P51957 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK4P51957 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK4P51957 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK4P51957 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC23.31■■□□□ 1.32
NEK4P51957 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
NEK4P51957 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK4P51957 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK4P51957 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
NEK4P51957 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.3■■□□□ 1.32
NEK4P51957 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NEK4P51957 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEK4P51957 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEK4P51957 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEK4P51957 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEK4P51957 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
NEK4P51957 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NEK4P51957 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.3■■□□□ 1.32
NEK4P51957 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.3■■□□□ 1.32
NEK4P51957 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.3■■□□□ 1.32
NEK4P51957 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.3■■□□□ 1.32
NEK4P51957 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC23.3■■□□□ 1.32
NEK4P51957 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEK4P51957 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEK4P51957 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
NEK4P51957 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC23.3■■□□□ 1.32
NEK4P51957 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC23.29■■□□□ 1.32
NEK4P51957 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
NEK4P51957 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.29■■□□□ 1.32
NEK4P51957 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
NEK4P51957 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NEK4P51957 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
NEK4P51957 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NEK4P51957 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NEK4P51957 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NEK4P51957 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NEK4P51957 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.29■■□□□ 1.32
NEK4P51957 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
NEK4P51957 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NEK4P51957 TFP1-202ENST00000475455 1573 ntBASIC23.29■■□□□ 1.32
NEK4P51957 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.29■■□□□ 1.32
NEK4P51957 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC23.29■■□□□ 1.32
NEK4P51957 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.29■■□□□ 1.32
NEK4P51957 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.29■■□□□ 1.32
NEK4P51957 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.29■■□□□ 1.32
NEK4P51957 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC23.29■■□□□ 1.32
NEK4P51957 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NEK4P51957 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC23.29■■□□□ 1.32
NEK4P51957 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NEK4P51957 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
NEK4P51957 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NEK4P51957 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.28■■□□□ 1.32
NEK4P51957 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NEK4P51957 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.28■■□□□ 1.32
NEK4P51957 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.28■■□□□ 1.32
NEK4P51957 STX6-204ENST00000542060 4809 ntTSL 2 BASIC23.28■■□□□ 1.32
NEK4P51957 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.28■■□□□ 1.32
NEK4P51957 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.28■■□□□ 1.32
NEK4P51957 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.28■■□□□ 1.32
NEK4P51957 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.28■■□□□ 1.32
NEK4P51957 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.28■■□□□ 1.32
NEK4P51957 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.28■■□□□ 1.32
NEK4P51957 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.28■■□□□ 1.32
NEK4P51957 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NEK4P51957 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC23.28■■□□□ 1.32
NEK4P51957 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
NEK4P51957 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC23.28■■□□□ 1.32
NEK4P51957 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC23.28■■□□□ 1.32
NEK4P51957 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
NEK4P51957 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
NEK4P51957 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
NEK4P51957 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NEK4P51957 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NEK4P51957 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
NEK4P51957 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NEK4P51957 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
NEK4P51957 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.27■■□□□ 1.32
NEK4P51957 MIPEPP3-201ENST00000412105 444 ntBASIC23.27■■□□□ 1.32
NEK4P51957 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.27■■□□□ 1.32
NEK4P51957 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.27■■□□□ 1.32
NEK4P51957 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms