Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.63■□□□□ 0.89
TUBP50607 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.63■□□□□ 0.89
TUBP50607 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBP50607 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.63■□□□□ 0.89
TUBP50607 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TUBP50607 AF186192.3-201ENST00000583427 947 ntBASIC20.63■□□□□ 0.89
TUBP50607 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBP50607 AC113410.3-201ENST00000623366 203 ntBASIC20.63■□□□□ 0.89
TUBP50607 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBP50607 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBP50607 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBP50607 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBP50607 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBP50607 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBP50607 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TUBP50607 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.63■□□□□ 0.89
TUBP50607 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBP50607 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TUBP50607 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBP50607 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
TUBP50607 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBP50607 AC087289.5-201ENST00000586076 3175 ntBASIC20.62■□□□□ 0.89
TUBP50607 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBP50607 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.62■□□□□ 0.89
TUBP50607 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBP50607 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBP50607 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TUBP50607 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.62■□□□□ 0.89
TUBP50607 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBP50607 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TUBP50607 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.62■□□□□ 0.89
TUBP50607 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.62■□□□□ 0.89
TUBP50607 AL353708.3-201ENST00000610272 989 ntBASIC20.62■□□□□ 0.89
TUBP50607 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBP50607 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBP50607 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBP50607 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TUBP50607 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.62■□□□□ 0.89
TUBP50607 AP006587.1-201ENST00000534129 1502 ntBASIC20.62■□□□□ 0.89
TUBP50607 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBP50607 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBP50607 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TUBP50607 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBP50607 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBP50607 AC018553.1-201ENST00000616682 1458 ntBASIC20.62■□□□□ 0.89
TUBP50607 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
TUBP50607 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBP50607 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBP50607 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.61■□□□□ 0.89
TUBP50607 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBP50607 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
TUBP50607 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBP50607 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBP50607 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.61■□□□□ 0.89
TUBP50607 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TUBP50607 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TUBP50607 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.61■□□□□ 0.89
TUBP50607 BX119927.1-201ENST00000636596 1552 ntBASIC20.61■□□□□ 0.89
TUBP50607 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBP50607 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TUBP50607 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TUBP50607 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.61■□□□□ 0.89
TUBP50607 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBP50607 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.61■□□□□ 0.89
TUBP50607 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBP50607 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBP50607 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBP50607 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TUBP50607 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
TUBP50607 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.61■□□□□ 0.89
TUBP50607 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TUBP50607 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBP50607 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TUBP50607 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBP50607 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TUBP50607 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.6■□□□□ 0.89
TUBP50607 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBP50607 KRT17P2-201ENST00000300992 1314 ntBASIC20.6■□□□□ 0.89
TUBP50607 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBP50607 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBP50607 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TUBP50607 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.6■□□□□ 0.89
TUBP50607 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.6■□□□□ 0.89
TUBP50607 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.6■□□□□ 0.89
TUBP50607 MIR4785-201ENST00000585005 73 ntBASIC20.6■□□□□ 0.89
TUBP50607 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.6■□□□□ 0.89
TUBP50607 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TUBP50607 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TUBP50607 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.6■□□□□ 0.89
TUBP50607 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.6■□□□□ 0.89
TUBP50607 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TUBP50607 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TUBP50607 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBP50607 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TUBP50607 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TUBP50607 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TUBP50607 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.59■□□□□ 0.89
TUBP50607 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBP50607 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBP50607 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms