Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1A1P48729 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.43■□□□□ 0.38
CSNK1A1P48729 POM121L13P-201ENST00000422362 380 ntBASIC17.43■□□□□ 0.38
CSNK1A1P48729 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1A1P48729 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.43■□□□□ 0.38
CSNK1A1P48729 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.43■□□□□ 0.38
CSNK1A1P48729 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1A1P48729 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.43■□□□□ 0.38
CSNK1A1P48729 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.43■□□□□ 0.38
CSNK1A1P48729 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.43■□□□□ 0.38
CSNK1A1P48729 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1A1P48729 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1A1P48729 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.43■□□□□ 0.38
CSNK1A1P48729 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.43■□□□□ 0.38
CSNK1A1P48729 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.43■□□□□ 0.38
CSNK1A1P48729 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1A1P48729 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.43■□□□□ 0.38
CSNK1A1P48729 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CSNK1A1P48729 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1A1P48729 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1A1P48729 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CSNK1A1P48729 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1A1P48729 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1A1P48729 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1A1P48729 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1A1P48729 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1A1P48729 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CSNK1A1P48729 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1A1P48729 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CSNK1A1P48729 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CSNK1A1P48729 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1A1P48729 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1A1P48729 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1A1P48729 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1A1P48729 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CSNK1A1P48729 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.42■□□□□ 0.38
CSNK1A1P48729 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.42■□□□□ 0.38
CSNK1A1P48729 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1A1P48729 AL121829.2-201ENST00000620908 328 ntBASIC17.42■□□□□ 0.38
CSNK1A1P48729 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1A1P48729 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1A1P48729 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1A1P48729 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.42■□□□□ 0.38
CSNK1A1P48729 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.42■□□□□ 0.38
CSNK1A1P48729 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1A1P48729 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.42■□□□□ 0.38
CSNK1A1P48729 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1A1P48729 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1A1P48729 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1A1P48729 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1A1P48729 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1A1P48729 AL158211.5-201ENST00000623583 2518 ntBASIC17.41■□□□□ 0.38
CSNK1A1P48729 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1A1P48729 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 AC026366.1-201ENST00000488803 879 ntBASIC17.41■□□□□ 0.38
CSNK1A1P48729 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1A1P48729 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1A1P48729 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1A1P48729 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1A1P48729 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 AP006587.1-201ENST00000534129 1502 ntBASIC17.41■□□□□ 0.38
CSNK1A1P48729 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1A1P48729 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.41■□□□□ 0.38
CSNK1A1P48729 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1A1P48729 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1A1P48729 TREX1-205ENST00000625293 1783 ntBASIC17.4■□□□□ 0.38
CSNK1A1P48729 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.4■□□□□ 0.38
CSNK1A1P48729 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1A1P48729 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.4■□□□□ 0.38
CSNK1A1P48729 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1A1P48729 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1A1P48729 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1A1P48729 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.4■□□□□ 0.38
CSNK1A1P48729 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1A1P48729 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.4■□□□□ 0.38
CSNK1A1P48729 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.4■□□□□ 0.38
CSNK1A1P48729 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.4■□□□□ 0.38
CSNK1A1P48729 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.4■□□□□ 0.38
CSNK1A1P48729 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.4■□□□□ 0.38
CSNK1A1P48729 AC008403.3-201ENST00000598924 454 ntBASIC17.4■□□□□ 0.38
CSNK1A1P48729 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.4■□□□□ 0.38
CSNK1A1P48729 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms