Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC026271.3-201ENST00000571884 352 ntBASIC20.88■□□□□ 0.93
BRCC3P46736 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRCC3P46736 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.88■□□□□ 0.93
BRCC3P46736 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRCC3P46736 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRCC3P46736 KRT8P8-201ENST00000434750 1448 ntBASIC20.87■□□□□ 0.93
BRCC3P46736 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
BRCC3P46736 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRCC3P46736 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.87■□□□□ 0.93
BRCC3P46736 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRCC3P46736 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRCC3P46736 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRCC3P46736 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRCC3P46736 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRCC3P46736 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRCC3P46736 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
BRCC3P46736 RCN1P1-201ENST00000400413 996 ntBASIC20.87■□□□□ 0.93
BRCC3P46736 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.87■□□□□ 0.93
BRCC3P46736 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.87■□□□□ 0.93
BRCC3P46736 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.87■□□□□ 0.93
BRCC3P46736 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRCC3P46736 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.87■□□□□ 0.93
BRCC3P46736 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.87■□□□□ 0.93
BRCC3P46736 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
BRCC3P46736 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BRCC3P46736 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
BRCC3P46736 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRCC3P46736 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
BRCC3P46736 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
BRCC3P46736 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRCC3P46736 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.86■□□□□ 0.93
BRCC3P46736 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.86■□□□□ 0.93
BRCC3P46736 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
BRCC3P46736 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.86■□□□□ 0.93
BRCC3P46736 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRCC3P46736 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.86■□□□□ 0.93
BRCC3P46736 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.86■□□□□ 0.93
BRCC3P46736 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.86■□□□□ 0.93
BRCC3P46736 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.86■□□□□ 0.93
BRCC3P46736 AC010947.1-201ENST00000623454 693 ntBASIC20.86■□□□□ 0.93
BRCC3P46736 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.86■□□□□ 0.93
BRCC3P46736 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRCC3P46736 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.86■□□□□ 0.93
BRCC3P46736 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.85■□□□□ 0.93
BRCC3P46736 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRCC3P46736 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRCC3P46736 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRCC3P46736 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.85■□□□□ 0.93
BRCC3P46736 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRCC3P46736 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
BRCC3P46736 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
BRCC3P46736 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRCC3P46736 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.85■□□□□ 0.93
BRCC3P46736 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRCC3P46736 AC008040.2-201ENST00000461049 708 ntBASIC20.85■□□□□ 0.93
BRCC3P46736 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRCC3P46736 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
BRCC3P46736 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.85■□□□□ 0.93
BRCC3P46736 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.85■□□□□ 0.93
BRCC3P46736 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRCC3P46736 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
BRCC3P46736 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRCC3P46736 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.85■□□□□ 0.93
BRCC3P46736 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.85■□□□□ 0.93
BRCC3P46736 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
BRCC3P46736 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRCC3P46736 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.85■□□□□ 0.93
BRCC3P46736 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BRCC3P46736 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
BRCC3P46736 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRCC3P46736 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRCC3P46736 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRCC3P46736 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
BRCC3P46736 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.84■□□□□ 0.93
BRCC3P46736 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.84■□□□□ 0.93
BRCC3P46736 NAPSB-206ENST00000562112 1266 ntBASIC20.84■□□□□ 0.93
BRCC3P46736 AC145285.6-201ENST00000604632 637 ntBASIC20.84■□□□□ 0.93
BRCC3P46736 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
BRCC3P46736 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
BRCC3P46736 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
BRCC3P46736 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRCC3P46736 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
BRCC3P46736 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRCC3P46736 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BRCC3P46736 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRCC3P46736 RCC2P6-201ENST00000526625 1557 ntBASIC20.84■□□□□ 0.93
BRCC3P46736 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.84■□□□□ 0.93
BRCC3P46736 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRCC3P46736 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRCC3P46736 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRCC3P46736 LINC01568-207ENST00000641790 1380 ntBASIC20.84■□□□□ 0.93
BRCC3P46736 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.84■□□□□ 0.93
BRCC3P46736 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRCC3P46736 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BRCC3P46736 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BRCC3P46736 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.83■□□□□ 0.93
BRCC3P46736 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRCC3P46736 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
BRCC3P46736 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.83■□□□□ 0.93
BRCC3P46736 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms