Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD40P25942 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD40P25942 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.91■□□□□ 0.3
CD40P25942 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CD40P25942 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD40P25942 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD40P25942 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD40P25942 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD40P25942 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD40P25942 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD40P25942 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD40P25942 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.9■□□□□ 0.3
CD40P25942 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CD40P25942 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.9■□□□□ 0.3
CD40P25942 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.9■□□□□ 0.3
CD40P25942 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.9■□□□□ 0.3
CD40P25942 AC116562.2-201ENST00000507042 360 ntBASIC16.9■□□□□ 0.3
CD40P25942 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.9■□□□□ 0.3
CD40P25942 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD40P25942 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD40P25942 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.9■□□□□ 0.3
CD40P25942 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.9■□□□□ 0.3
CD40P25942 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.9■□□□□ 0.3
CD40P25942 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD40P25942 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD40P25942 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD40P25942 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD40P25942 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD40P25942 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD40P25942 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD40P25942 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.9■□□□□ 0.3
CD40P25942 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CD40P25942 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.89■□□□□ 0.3
CD40P25942 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CD40P25942 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CD40P25942 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CD40P25942 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CD40P25942 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD40P25942 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CD40P25942 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD40P25942 LINC01006-201ENST00000333319 2292 ntBASIC16.89■□□□□ 0.29
CD40P25942 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD40P25942 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
CD40P25942 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CD40P25942 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD40P25942 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD40P25942 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD40P25942 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD40P25942 UNC93B2-201ENST00000285383 730 ntBASIC16.89■□□□□ 0.29
CD40P25942 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD40P25942 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.89■□□□□ 0.29
CD40P25942 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD40P25942 AC087499.1-201ENST00000418141 1075 ntBASIC16.89■□□□□ 0.29
CD40P25942 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.89■□□□□ 0.29
CD40P25942 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD40P25942 ECEL1P3-201ENST00000427961 737 ntBASIC16.89■□□□□ 0.29
CD40P25942 RBM17P1-201ENST00000453646 1190 ntBASIC16.89■□□□□ 0.29
CD40P25942 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.89■□□□□ 0.29
CD40P25942 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.89■□□□□ 0.29
CD40P25942 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CD40P25942 AC026271.3-201ENST00000571884 352 ntBASIC16.89■□□□□ 0.29
CD40P25942 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.89■□□□□ 0.29
CD40P25942 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.89■□□□□ 0.29
CD40P25942 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD40P25942 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD40P25942 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CD40P25942 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.89■□□□□ 0.29
CD40P25942 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD40P25942 AC009237.14-201ENST00000609975 1594 ntBASIC16.89■□□□□ 0.29
CD40P25942 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD40P25942 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.89■□□□□ 0.29
CD40P25942 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD40P25942 KRT8P8-201ENST00000434750 1448 ntBASIC16.88■□□□□ 0.29
CD40P25942 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD40P25942 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CD40P25942 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.88■□□□□ 0.29
CD40P25942 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD40P25942 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD40P25942 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD40P25942 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD40P25942 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CD40P25942 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD40P25942 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD40P25942 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD40P25942 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD40P25942 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD40P25942 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.88■□□□□ 0.29
CD40P25942 LINC01023-201ENST00000606054 436 ntBASIC16.88■□□□□ 0.29
CD40P25942 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.88■□□□□ 0.29
CD40P25942 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.88■□□□□ 0.29
CD40P25942 AC131212.4-201ENST00000623606 975 ntBASIC16.88■□□□□ 0.29
CD40P25942 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD40P25942 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.88■□□□□ 0.29
CD40P25942 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CD40P25942 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD40P25942 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD40P25942 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD40P25942 AC099778.1-201ENST00000568593 1911 ntBASIC16.88■□□□□ 0.29
CD40P25942 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD40P25942 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms