Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT4P19013 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
KRT4P19013 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT4P19013 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.63■□□□□ 0.73
KRT4P19013 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
KRT4P19013 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
KRT4P19013 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT4P19013 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT4P19013 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.63■□□□□ 0.73
KRT4P19013 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT4P19013 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT4P19013 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
KRT4P19013 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT4P19013 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.63■□□□□ 0.73
KRT4P19013 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.63■□□□□ 0.73
KRT4P19013 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.63■□□□□ 0.73
KRT4P19013 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT4P19013 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.63■□□□□ 0.73
KRT4P19013 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.63■□□□□ 0.73
KRT4P19013 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRT4P19013 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT4P19013 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT4P19013 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRT4P19013 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT4P19013 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
KRT4P19013 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.62■□□□□ 0.73
KRT4P19013 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRT4P19013 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.62■□□□□ 0.73
KRT4P19013 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT4P19013 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT4P19013 MCRIP2P1-201ENST00000394346 511 ntBASIC19.62■□□□□ 0.73
KRT4P19013 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT4P19013 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
KRT4P19013 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
KRT4P19013 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT4P19013 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT4P19013 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT4P19013 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRT4P19013 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.61■□□□□ 0.73
KRT4P19013 AL161938.1-201ENST00000569833 2180 ntBASIC19.61■□□□□ 0.73
KRT4P19013 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT4P19013 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT4P19013 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KRT4P19013 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
KRT4P19013 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
KRT4P19013 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT4P19013 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT4P19013 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
KRT4P19013 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT4P19013 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT4P19013 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT4P19013 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT4P19013 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT4P19013 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.61■□□□□ 0.73
KRT4P19013 AC026471.1-201ENST00000564629 3026 ntBASIC19.61■□□□□ 0.73
KRT4P19013 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT4P19013 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT4P19013 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT4P19013 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT4P19013 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.61■□□□□ 0.73
KRT4P19013 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT4P19013 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT4P19013 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.6■□□□□ 0.73
KRT4P19013 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
KRT4P19013 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
KRT4P19013 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
KRT4P19013 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.6■□□□□ 0.73
KRT4P19013 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.6■□□□□ 0.73
KRT4P19013 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.6■□□□□ 0.73
KRT4P19013 AC007322.4-201ENST00000509611 723 ntBASIC19.6■□□□□ 0.73
KRT4P19013 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.6■□□□□ 0.73
KRT4P19013 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
KRT4P19013 AC100791.3-201ENST00000617619 330 ntBASIC19.6■□□□□ 0.73
KRT4P19013 AC105020.6-201ENST00000621523 1217 ntBASIC19.6■□□□□ 0.73
KRT4P19013 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
KRT4P19013 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
KRT4P19013 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.6■□□□□ 0.73
KRT4P19013 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT4P19013 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT4P19013 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms