Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCLP18206 AC008403.3-201ENST00000598924 454 ntBASIC19.67■□□□□ 0.74
VCLP18206 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCLP18206 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.67■□□□□ 0.74
VCLP18206 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.67■□□□□ 0.74
VCLP18206 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCLP18206 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCLP18206 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VCLP18206 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCLP18206 KRT8P17-201ENST00000453110 1448 ntBASIC19.67■□□□□ 0.74
VCLP18206 AC116562.4-201ENST00000641316 2276 ntBASIC19.67■□□□□ 0.74
VCLP18206 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.67■□□□□ 0.74
VCLP18206 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.67■□□□□ 0.74
VCLP18206 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.66■□□□□ 0.74
VCLP18206 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VCLP18206 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.66■□□□□ 0.74
VCLP18206 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VCLP18206 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCLP18206 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCLP18206 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.66■□□□□ 0.74
VCLP18206 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCLP18206 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VCLP18206 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCLP18206 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.66■□□□□ 0.74
VCLP18206 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.66■□□□□ 0.74
VCLP18206 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.66■□□□□ 0.74
VCLP18206 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.66■□□□□ 0.74
VCLP18206 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.66■□□□□ 0.74
VCLP18206 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
VCLP18206 AC120498.8-201ENST00000614275 531 ntBASIC19.66■□□□□ 0.74
VCLP18206 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
VCLP18206 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.66■□□□□ 0.74
VCLP18206 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VCLP18206 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCLP18206 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.66■□□□□ 0.74
VCLP18206 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCLP18206 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCLP18206 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
VCLP18206 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
VCLP18206 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
VCLP18206 PTBP1P-201ENST00000554374 1601 ntBASIC19.65■□□□□ 0.74
VCLP18206 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCLP18206 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCLP18206 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCLP18206 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VCLP18206 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCLP18206 AC128676.1-201ENST00000454392 318 ntBASIC19.65■□□□□ 0.74
VCLP18206 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.65■□□□□ 0.74
VCLP18206 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.65■□□□□ 0.74
VCLP18206 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VCLP18206 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCLP18206 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
VCLP18206 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
VCLP18206 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VCLP18206 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
VCLP18206 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCLP18206 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCLP18206 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.65■□□□□ 0.74
VCLP18206 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
VCLP18206 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
VCLP18206 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VCLP18206 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VCLP18206 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
VCLP18206 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
VCLP18206 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VCLP18206 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.64■□□□□ 0.73
VCLP18206 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
VCLP18206 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.64■□□□□ 0.73
VCLP18206 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.64■□□□□ 0.73
VCLP18206 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.64■□□□□ 0.73
VCLP18206 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.64■□□□□ 0.73
VCLP18206 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.64■□□□□ 0.73
VCLP18206 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VCLP18206 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
VCLP18206 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VCLP18206 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VCLP18206 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VCLP18206 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VCLP18206 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VCLP18206 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VCLP18206 AC026471.1-201ENST00000564629 3026 ntBASIC19.63■□□□□ 0.73
VCLP18206 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
VCLP18206 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.63■□□□□ 0.73
VCLP18206 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VCLP18206 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.63■□□□□ 0.73
VCLP18206 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
VCLP18206 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VCLP18206 BX119927.1-201ENST00000636596 1552 ntBASIC19.63■□□□□ 0.73
VCLP18206 KRT16P6-202ENST00000425692 1426 ntBASIC19.63■□□□□ 0.73
VCLP18206 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
VCLP18206 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.63■□□□□ 0.73
VCLP18206 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VCLP18206 AC073648.6-201ENST00000641589 218 ntBASIC19.63■□□□□ 0.73
VCLP18206 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VCLP18206 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VCLP18206 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.63■□□□□ 0.73
VCLP18206 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VCLP18206 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCLP18206 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCLP18206 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms