Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AL121906.2-201ENST00000621597 723 ntBASIC18.03■□□□□ 0.48
THBS1P07996 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THBS1P07996 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THBS1P07996 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.03■□□□□ 0.48
THBS1P07996 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THBS1P07996 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
THBS1P07996 AL032819.2-201ENST00000624543 2162 ntBASIC18.03■□□□□ 0.48
THBS1P07996 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THBS1P07996 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THBS1P07996 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THBS1P07996 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THBS1P07996 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
THBS1P07996 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THBS1P07996 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
THBS1P07996 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THBS1P07996 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THBS1P07996 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THBS1P07996 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
THBS1P07996 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
THBS1P07996 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
THBS1P07996 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.02■□□□□ 0.48
THBS1P07996 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.02■□□□□ 0.48
THBS1P07996 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.02■□□□□ 0.48
THBS1P07996 PNMA6B-201ENST00000538162 1200 ntBASIC18.02■□□□□ 0.48
THBS1P07996 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.02■□□□□ 0.48
THBS1P07996 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.02■□□□□ 0.48
THBS1P07996 AC133041.1-202ENST00000642053 222 ntBASIC18.02■□□□□ 0.48
THBS1P07996 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THBS1P07996 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
THBS1P07996 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
THBS1P07996 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
THBS1P07996 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.02■□□□□ 0.47
THBS1P07996 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
THBS1P07996 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THBS1P07996 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THBS1P07996 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THBS1P07996 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.01■□□□□ 0.47
THBS1P07996 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THBS1P07996 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
THBS1P07996 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THBS1P07996 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.01■□□□□ 0.47
THBS1P07996 TSPY20P-201ENST00000450910 630 ntBASIC18.01■□□□□ 0.47
THBS1P07996 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
THBS1P07996 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.01■□□□□ 0.47
THBS1P07996 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
THBS1P07996 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
THBS1P07996 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THBS1P07996 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.01■□□□□ 0.47
THBS1P07996 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THBS1P07996 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
THBS1P07996 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
THBS1P07996 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18■□□□□ 0.47
THBS1P07996 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
THBS1P07996 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
THBS1P07996 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
THBS1P07996 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18■□□□□ 0.47
THBS1P07996 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18■□□□□ 0.47
THBS1P07996 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18■□□□□ 0.47
THBS1P07996 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18■□□□□ 0.47
THBS1P07996 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
THBS1P07996 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
THBS1P07996 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
THBS1P07996 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18■□□□□ 0.47
THBS1P07996 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
THBS1P07996 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18■□□□□ 0.47
THBS1P07996 SLC29A4P2-201ENST00000504749 1089 ntBASIC18■□□□□ 0.47
THBS1P07996 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18■□□□□ 0.47
THBS1P07996 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
THBS1P07996 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18■□□□□ 0.47
THBS1P07996 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18■□□□□ 0.47
THBS1P07996 AC083880.1-201ENST00000608266 535 ntBASIC18■□□□□ 0.47
THBS1P07996 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
THBS1P07996 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
THBS1P07996 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18■□□□□ 0.47
THBS1P07996 AC124283.5-201ENST00000624661 1809 ntBASIC18■□□□□ 0.47
THBS1P07996 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
THBS1P07996 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18■□□□□ 0.47
THBS1P07996 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
THBS1P07996 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
THBS1P07996 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
THBS1P07996 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
THBS1P07996 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
THBS1P07996 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
THBS1P07996 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
THBS1P07996 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
THBS1P07996 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
THBS1P07996 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.99■□□□□ 0.47
THBS1P07996 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.99■□□□□ 0.47
THBS1P07996 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
THBS1P07996 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.99■□□□□ 0.47
THBS1P07996 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
THBS1P07996 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
THBS1P07996 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.99■□□□□ 0.47
THBS1P07996 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.99■□□□□ 0.47
THBS1P07996 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
THBS1P07996 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
THBS1P07996 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.99■□□□□ 0.47
THBS1P07996 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
THBS1P07996 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
THBS1P07996 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms