Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
MT-ND3P03897 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MT-ND3P03897 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MT-ND3P03897 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.91■□□□□ 0.78
MT-ND3P03897 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.91■□□□□ 0.78
MT-ND3P03897 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.91■□□□□ 0.78
MT-ND3P03897 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
MT-ND3P03897 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MT-ND3P03897 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MT-ND3P03897 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.91■□□□□ 0.78
MT-ND3P03897 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.91■□□□□ 0.78
MT-ND3P03897 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
MT-ND3P03897 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
MT-ND3P03897 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
MT-ND3P03897 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MT-ND3P03897 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MT-ND3P03897 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MT-ND3P03897 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MT-ND3P03897 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.91■□□□□ 0.78
MT-ND3P03897 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.91■□□□□ 0.78
MT-ND3P03897 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND3P03897 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND3P03897 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND3P03897 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND3P03897 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
MT-ND3P03897 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND3P03897 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
MT-ND3P03897 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
MT-ND3P03897 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
MT-ND3P03897 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.9■□□□□ 0.78
MT-ND3P03897 MIPEPP3-201ENST00000412105 444 ntBASIC19.9■□□□□ 0.78
MT-ND3P03897 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND3P03897 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND3P03897 AL591742.1-201ENST00000604433 565 ntBASIC19.9■□□□□ 0.78
MT-ND3P03897 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.9■□□□□ 0.78
MT-ND3P03897 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.9■□□□□ 0.78
MT-ND3P03897 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND3P03897 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND3P03897 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND3P03897 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND3P03897 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND3P03897 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND3P03897 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND3P03897 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND3P03897 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND3P03897 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.78
MT-ND3P03897 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-ND3P03897 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-ND3P03897 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MT-ND3P03897 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.89■□□□□ 0.77
MT-ND3P03897 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-ND3P03897 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.89■□□□□ 0.77
MT-ND3P03897 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-ND3P03897 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-ND3P03897 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.89■□□□□ 0.77
MT-ND3P03897 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.89■□□□□ 0.77
MT-ND3P03897 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MT-ND3P03897 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.89■□□□□ 0.77
MT-ND3P03897 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.89■□□□□ 0.77
MT-ND3P03897 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-ND3P03897 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
MT-ND3P03897 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
MT-ND3P03897 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MT-ND3P03897 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-ND3P03897 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND3P03897 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND3P03897 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.88■□□□□ 0.77
MT-ND3P03897 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND3P03897 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND3P03897 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
MT-ND3P03897 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.88■□□□□ 0.77
MT-ND3P03897 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND3P03897 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.88■□□□□ 0.77
MT-ND3P03897 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.88■□□□□ 0.77
MT-ND3P03897 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND3P03897 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND3P03897 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND3P03897 KRT8P17-201ENST00000453110 1448 ntBASIC19.88■□□□□ 0.77
MT-ND3P03897 AC020763.4-201ENST00000623414 4170 ntBASIC19.88■□□□□ 0.77
MT-ND3P03897 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND3P03897 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND3P03897 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND3P03897 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
MT-ND3P03897 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND3P03897 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
MT-ND3P03897 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
MT-ND3P03897 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.88■□□□□ 0.77
MT-ND3P03897 TSPY20P-201ENST00000450910 630 ntBASIC19.88■□□□□ 0.77
MT-ND3P03897 FAM201B-201ENST00000458407 597 ntBASIC19.88■□□□□ 0.77
MT-ND3P03897 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.88■□□□□ 0.77
MT-ND3P03897 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.88■□□□□ 0.77
MT-ND3P03897 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.88■□□□□ 0.77
MT-ND3P03897 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.88■□□□□ 0.77
MT-ND3P03897 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND3P03897 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
MT-ND3P03897 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND3P03897 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND3P03897 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
MT-ND3P03897 AL032819.2-201ENST00000624543 2162 ntBASIC19.88■□□□□ 0.77
MT-ND3P03897 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms