Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CPNE6O95741 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.24■□□□□ 0.67
CPNE6O95741 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE6O95741 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.24■□□□□ 0.67
CPNE6O95741 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE6O95741 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.24■□□□□ 0.67
CPNE6O95741 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE6O95741 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE6O95741 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CPNE6O95741 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CPNE6O95741 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE6O95741 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE6O95741 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.24■□□□□ 0.67
CPNE6O95741 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.24■□□□□ 0.67
CPNE6O95741 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.24■□□□□ 0.67
CPNE6O95741 AF186192.3-201ENST00000583427 947 ntBASIC19.24■□□□□ 0.67
CPNE6O95741 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.24■□□□□ 0.67
CPNE6O95741 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.24■□□□□ 0.67
CPNE6O95741 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE6O95741 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE6O95741 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CPNE6O95741 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE6O95741 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CPNE6O95741 AC006128.1-201ENST00000624704 1661 ntBASIC19.24■□□□□ 0.67
CPNE6O95741 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.23■□□□□ 0.67
CPNE6O95741 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE6O95741 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE6O95741 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE6O95741 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CPNE6O95741 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE6O95741 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE6O95741 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.23■□□□□ 0.67
CPNE6O95741 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CPNE6O95741 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE6O95741 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CPNE6O95741 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.23■□□□□ 0.67
CPNE6O95741 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.23■□□□□ 0.67
CPNE6O95741 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE6O95741 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
CPNE6O95741 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.23■□□□□ 0.67
CPNE6O95741 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CPNE6O95741 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.23■□□□□ 0.67
CPNE6O95741 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.23■□□□□ 0.67
CPNE6O95741 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE6O95741 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.23■□□□□ 0.67
CPNE6O95741 AL031963.3-201ENST00000606441 850 ntBASIC19.23■□□□□ 0.67
CPNE6O95741 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE6O95741 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE6O95741 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE6O95741 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE6O95741 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE6O95741 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE6O95741 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
CPNE6O95741 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.23■□□□□ 0.67
CPNE6O95741 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE6O95741 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE6O95741 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE6O95741 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.22■□□□□ 0.67
CPNE6O95741 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE6O95741 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE6O95741 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CPNE6O95741 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE6O95741 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE6O95741 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE6O95741 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE6O95741 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE6O95741 AL355075.4-201ENST00000554988 638 ntBASIC19.22■□□□□ 0.67
CPNE6O95741 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.22■□□□□ 0.67
CPNE6O95741 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE6O95741 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE6O95741 AC026471.5-201ENST00000615068 467 ntBASIC19.22■□□□□ 0.67
CPNE6O95741 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE6O95741 PLK5-205ENST00000642079 1969 ntBASIC19.22■□□□□ 0.67
CPNE6O95741 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.22■□□□□ 0.67
CPNE6O95741 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE6O95741 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE6O95741 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CPNE6O95741 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE6O95741 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE6O95741 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE6O95741 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CPNE6O95741 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE6O95741 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE6O95741 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE6O95741 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE6O95741 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.21■□□□□ 0.67
CPNE6O95741 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CPNE6O95741 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE6O95741 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE6O95741 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CPNE6O95741 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CPNE6O95741 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CPNE6O95741 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.21■□□□□ 0.67
CPNE6O95741 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.21■□□□□ 0.67
CPNE6O95741 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.21■□□□□ 0.67
CPNE6O95741 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE6O95741 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE6O95741 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.21■□□□□ 0.67
CPNE6O95741 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE6O95741 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms