Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SOX30O94993 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SOX30O94993 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SOX30O94993 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SOX30O94993 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SOX30O94993 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SOX30O94993 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX30O94993 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.22■□□□□ 0.51
SOX30O94993 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.22■□□□□ 0.51
SOX30O94993 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SOX30O94993 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.22■□□□□ 0.51
SOX30O94993 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX30O94993 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SOX30O94993 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.22■□□□□ 0.51
SOX30O94993 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.22■□□□□ 0.51
SOX30O94993 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.22■□□□□ 0.51
SOX30O94993 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.22■□□□□ 0.51
SOX30O94993 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.22■□□□□ 0.51
SOX30O94993 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.22■□□□□ 0.51
SOX30O94993 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX30O94993 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.22■□□□□ 0.51
SOX30O94993 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.22■□□□□ 0.51
SOX30O94993 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.22■□□□□ 0.51
SOX30O94993 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX30O94993 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX30O94993 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SOX30O94993 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.21■□□□□ 0.51
SOX30O94993 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.21■□□□□ 0.51
SOX30O94993 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX30O94993 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX30O94993 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX30O94993 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX30O94993 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX30O94993 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX30O94993 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX30O94993 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SOX30O94993 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SOX30O94993 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX30O94993 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SOX30O94993 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX30O94993 YBX1P10-201ENST00000444752 975 ntBASIC18.21■□□□□ 0.51
SOX30O94993 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.21■□□□□ 0.51
SOX30O94993 UNC93B4-201ENST00000505679 747 ntBASIC18.21■□□□□ 0.51
SOX30O94993 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.21■□□□□ 0.51
SOX30O94993 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.21■□□□□ 0.51
SOX30O94993 AC008687.6-201ENST00000596318 630 ntBASIC18.21■□□□□ 0.51
SOX30O94993 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX30O94993 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.21■□□□□ 0.51
SOX30O94993 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.21■□□□□ 0.51
SOX30O94993 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX30O94993 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.21■□□□□ 0.51
SOX30O94993 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX30O94993 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SOX30O94993 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX30O94993 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX30O94993 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.21■□□□□ 0.51
SOX30O94993 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX30O94993 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX30O94993 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SOX30O94993 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX30O94993 AP006587.1-201ENST00000534129 1502 ntBASIC18.2■□□□□ 0.5
SOX30O94993 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX30O94993 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX30O94993 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX30O94993 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX30O94993 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.2■□□□□ 0.5
SOX30O94993 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SOX30O94993 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.2■□□□□ 0.5
SOX30O94993 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX30O94993 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SOX30O94993 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX30O94993 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX30O94993 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX30O94993 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.2■□□□□ 0.5
SOX30O94993 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX30O94993 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SOX30O94993 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX30O94993 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX30O94993 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SOX30O94993 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SOX30O94993 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX30O94993 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SOX30O94993 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX30O94993 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX30O94993 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SOX30O94993 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.19■□□□□ 0.5
SOX30O94993 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX30O94993 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
SOX30O94993 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SOX30O94993 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SOX30O94993 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SOX30O94993 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SOX30O94993 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX30O94993 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX30O94993 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX30O94993 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX30O94993 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SOX30O94993 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SOX30O94993 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SOX30O94993 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms