Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC24.78■■□□□ 1.56
CACNA1FO60840 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC24.78■■□□□ 1.56
CACNA1FO60840 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CACNA1FO60840 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC24.78■■□□□ 1.56
CACNA1FO60840 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CACNA1FO60840 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC24.78■■□□□ 1.56
CACNA1FO60840 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CACNA1FO60840 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CACNA1FO60840 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CACNA1FO60840 AC104417.2-201ENST00000562989 1793 ntBASIC24.77■■□□□ 1.56
CACNA1FO60840 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CACNA1FO60840 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CACNA1FO60840 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CACNA1FO60840 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC24.77■■□□□ 1.56
CACNA1FO60840 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC24.77■■□□□ 1.56
CACNA1FO60840 C2orf69P3-201ENST00000565542 1120 ntBASIC24.77■■□□□ 1.56
CACNA1FO60840 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
CACNA1FO60840 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CACNA1FO60840 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CACNA1FO60840 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CACNA1FO60840 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
CACNA1FO60840 RCC2P6-201ENST00000526625 1557 ntBASIC24.77■■□□□ 1.56
CACNA1FO60840 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC24.77■■□□□ 1.56
CACNA1FO60840 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.56
CACNA1FO60840 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.56
CACNA1FO60840 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
CACNA1FO60840 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
CACNA1FO60840 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC24.76■■□□□ 1.55
CACNA1FO60840 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CACNA1FO60840 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CACNA1FO60840 PTPA-216ENST00000432651 857 ntTSL 2 BASIC24.76■■□□□ 1.55
CACNA1FO60840 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC24.76■■□□□ 1.55
CACNA1FO60840 RPS20-210ENST00000523936 899 ntTSL 2 BASIC24.76■■□□□ 1.55
CACNA1FO60840 AP003071.4-201ENST00000562276 1284 ntBASIC24.76■■□□□ 1.55
CACNA1FO60840 MIR6786-201ENST00000616843 113 ntBASIC24.76■■□□□ 1.55
CACNA1FO60840 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CACNA1FO60840 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CACNA1FO60840 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CACNA1FO60840 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC24.76■■□□□ 1.55
CACNA1FO60840 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC24.76■■□□□ 1.55
CACNA1FO60840 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
CACNA1FO60840 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC24.76■■□□□ 1.55
CACNA1FO60840 ME2-218ENST00000640965 2476 ntTSL 5 BASIC24.76■■□□□ 1.55
CACNA1FO60840 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CACNA1FO60840 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CACNA1FO60840 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.76■■□□□ 1.55
CACNA1FO60840 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC24.76■■□□□ 1.55
CACNA1FO60840 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC24.76■■□□□ 1.55
CACNA1FO60840 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CACNA1FO60840 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CACNA1FO60840 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC24.76■■□□□ 1.55
CACNA1FO60840 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CACNA1FO60840 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CACNA1FO60840 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CACNA1FO60840 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC24.75■■□□□ 1.55
CACNA1FO60840 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC24.75■■□□□ 1.55
CACNA1FO60840 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CACNA1FO60840 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC24.75■■□□□ 1.55
CACNA1FO60840 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CACNA1FO60840 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CACNA1FO60840 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CACNA1FO60840 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CACNA1FO60840 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CACNA1FO60840 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
CACNA1FO60840 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
CACNA1FO60840 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC24.74■■□□□ 1.55
CACNA1FO60840 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC24.74■■□□□ 1.55
CACNA1FO60840 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC24.74■■□□□ 1.55
CACNA1FO60840 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CACNA1FO60840 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CACNA1FO60840 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CACNA1FO60840 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CACNA1FO60840 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CACNA1FO60840 UNC93B2-201ENST00000285383 730 ntBASIC24.74■■□□□ 1.55
CACNA1FO60840 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CACNA1FO60840 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CACNA1FO60840 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CACNA1FO60840 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CACNA1FO60840 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC24.74■■□□□ 1.55
CACNA1FO60840 KRT8P41-201ENST00000533985 1514 ntBASIC24.74■■□□□ 1.55
CACNA1FO60840 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CACNA1FO60840 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CACNA1FO60840 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC24.73■■□□□ 1.55
CACNA1FO60840 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CACNA1FO60840 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CACNA1FO60840 B3GAT3P1-201ENST00000471720 806 ntBASIC24.73■■□□□ 1.55
CACNA1FO60840 AC011506.1-201ENST00000474329 610 ntBASIC24.73■■□□□ 1.55
CACNA1FO60840 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC24.73■■□□□ 1.55
CACNA1FO60840 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CACNA1FO60840 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
CACNA1FO60840 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC24.73■■□□□ 1.55
CACNA1FO60840 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CACNA1FO60840 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CACNA1FO60840 AL160286.2-201ENST00000567150 934 ntBASIC24.73■■□□□ 1.55
CACNA1FO60840 AC026471.5-201ENST00000615068 467 ntBASIC24.73■■□□□ 1.55
CACNA1FO60840 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC24.73■■□□□ 1.55
CACNA1FO60840 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CACNA1FO60840 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CACNA1FO60840 KRT17P2-201ENST00000300992 1314 ntBASIC24.72■■□□□ 1.55
CACNA1FO60840 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC24.72■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms