Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.68■□□□□ 0.42
ZIC3O60481 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
ZIC3O60481 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.68■□□□□ 0.42
ZIC3O60481 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZIC3O60481 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZIC3O60481 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZIC3O60481 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZIC3O60481 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
ZIC3O60481 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.67■□□□□ 0.42
ZIC3O60481 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZIC3O60481 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZIC3O60481 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.67■□□□□ 0.42
ZIC3O60481 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZIC3O60481 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZIC3O60481 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZIC3O60481 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
ZIC3O60481 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.67■□□□□ 0.42
ZIC3O60481 MIR4497-201ENST00000583208 89 ntBASIC17.67■□□□□ 0.42
ZIC3O60481 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ZIC3O60481 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZIC3O60481 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZIC3O60481 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZIC3O60481 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZIC3O60481 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZIC3O60481 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZIC3O60481 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC3O60481 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC3O60481 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC3O60481 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC3O60481 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.66■□□□□ 0.42
ZIC3O60481 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC3O60481 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC3O60481 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
ZIC3O60481 NIFKP9-201ENST00000419265 221 ntBASIC17.66■□□□□ 0.42
ZIC3O60481 SNORA78-201ENST00000459373 127 ntBASIC17.66■□□□□ 0.42
ZIC3O60481 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.66■□□□□ 0.42
ZIC3O60481 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC3O60481 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.66■□□□□ 0.42
ZIC3O60481 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.66■□□□□ 0.42
ZIC3O60481 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC3O60481 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC3O60481 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ZIC3O60481 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.66■□□□□ 0.42
ZIC3O60481 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC3O60481 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC3O60481 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC3O60481 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC3O60481 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC3O60481 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.66■□□□□ 0.42
ZIC3O60481 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC3O60481 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC3O60481 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.65■□□□□ 0.42
ZIC3O60481 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.65■□□□□ 0.42
ZIC3O60481 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.65■□□□□ 0.42
ZIC3O60481 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZIC3O60481 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.65■□□□□ 0.42
ZIC3O60481 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ZIC3O60481 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZIC3O60481 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZIC3O60481 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.65■□□□□ 0.42
ZIC3O60481 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.65■□□□□ 0.42
ZIC3O60481 TSPY7P-201ENST00000431358 1114 ntBASIC17.65■□□□□ 0.42
ZIC3O60481 KSR1P1-201ENST00000446298 240 ntBASIC17.65■□□□□ 0.42
ZIC3O60481 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ZIC3O60481 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZIC3O60481 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.65■□□□□ 0.42
ZIC3O60481 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.65■□□□□ 0.42
ZIC3O60481 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.65■□□□□ 0.42
ZIC3O60481 CD177P1-201ENST00000606252 935 ntBASIC17.65■□□□□ 0.42
ZIC3O60481 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.65■□□□□ 0.42
ZIC3O60481 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZIC3O60481 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZIC3O60481 AC073130.3-201ENST00000624389 2278 ntBASIC17.65■□□□□ 0.42
ZIC3O60481 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.65■□□□□ 0.42
ZIC3O60481 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
ZIC3O60481 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZIC3O60481 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZIC3O60481 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.65■□□□□ 0.42
ZIC3O60481 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.64■□□□□ 0.42
ZIC3O60481 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC3O60481 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC3O60481 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC3O60481 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC3O60481 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC3O60481 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC3O60481 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC3O60481 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC3O60481 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC3O60481 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC3O60481 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
ZIC3O60481 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.64■□□□□ 0.41
ZIC3O60481 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
ZIC3O60481 FAM197Y1-201ENST00000421178 764 ntBASIC17.64■□□□□ 0.41
ZIC3O60481 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.64■□□□□ 0.41
ZIC3O60481 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC3O60481 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.64■□□□□ 0.41
ZIC3O60481 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.64■□□□□ 0.41
ZIC3O60481 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.64■□□□□ 0.41
ZIC3O60481 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC3O60481 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms