Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRICKLE3O43900 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PRICKLE3O43900 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRICKLE3O43900 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRICKLE3O43900 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRICKLE3O43900 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.85■□□□□ 0.61
PRICKLE3O43900 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.85■□□□□ 0.61
PRICKLE3O43900 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRICKLE3O43900 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.85■□□□□ 0.61
PRICKLE3O43900 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRICKLE3O43900 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRICKLE3O43900 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRICKLE3O43900 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRICKLE3O43900 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRICKLE3O43900 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.85■□□□□ 0.61
PRICKLE3O43900 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRICKLE3O43900 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.85■□□□□ 0.61
PRICKLE3O43900 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRICKLE3O43900 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRICKLE3O43900 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRICKLE3O43900 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.85■□□□□ 0.61
PRICKLE3O43900 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRICKLE3O43900 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRICKLE3O43900 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PRICKLE3O43900 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.85■□□□□ 0.61
PRICKLE3O43900 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRICKLE3O43900 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.85■□□□□ 0.61
PRICKLE3O43900 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRICKLE3O43900 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.84■□□□□ 0.61
PRICKLE3O43900 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRICKLE3O43900 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PRICKLE3O43900 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.84■□□□□ 0.61
PRICKLE3O43900 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRICKLE3O43900 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRICKLE3O43900 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRICKLE3O43900 HTR7P1-201ENST00000538670 1336 ntBASIC18.84■□□□□ 0.61
PRICKLE3O43900 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRICKLE3O43900 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRICKLE3O43900 PCDHAC2-203ENST00000615316 3011 ntBASIC18.84■□□□□ 0.61
PRICKLE3O43900 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.84■□□□□ 0.61
PRICKLE3O43900 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PRICKLE3O43900 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
PRICKLE3O43900 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.84■□□□□ 0.61
PRICKLE3O43900 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.84■□□□□ 0.61
PRICKLE3O43900 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRICKLE3O43900 AC008550.1-201ENST00000511500 884 ntBASIC18.84■□□□□ 0.61
PRICKLE3O43900 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.84■□□□□ 0.61
PRICKLE3O43900 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.84■□□□□ 0.61
PRICKLE3O43900 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRICKLE3O43900 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.84■□□□□ 0.61
PRICKLE3O43900 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.84■□□□□ 0.61
PRICKLE3O43900 Z99916.2-201ENST00000604037 246 ntBASIC18.84■□□□□ 0.61
PRICKLE3O43900 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRICKLE3O43900 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRICKLE3O43900 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRICKLE3O43900 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRICKLE3O43900 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.83■□□□□ 0.61
PRICKLE3O43900 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
PRICKLE3O43900 KRT8P8-201ENST00000434750 1448 ntBASIC18.83■□□□□ 0.61
PRICKLE3O43900 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.83■□□□□ 0.61
PRICKLE3O43900 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.83■□□□□ 0.61
PRICKLE3O43900 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.83■□□□□ 0.61
PRICKLE3O43900 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.83■□□□□ 0.61
PRICKLE3O43900 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PRICKLE3O43900 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRICKLE3O43900 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRICKLE3O43900 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
PRICKLE3O43900 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.83■□□□□ 0.6
PRICKLE3O43900 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.83■□□□□ 0.6
PRICKLE3O43900 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRICKLE3O43900 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.83■□□□□ 0.6
PRICKLE3O43900 AL353708.3-201ENST00000610272 989 ntBASIC18.83■□□□□ 0.6
PRICKLE3O43900 AP006294.2-201ENST00000641667 209 ntBASIC18.83■□□□□ 0.6
PRICKLE3O43900 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.83■□□□□ 0.6
PRICKLE3O43900 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.83■□□□□ 0.6
PRICKLE3O43900 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.83■□□□□ 0.6
PRICKLE3O43900 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRICKLE3O43900 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRICKLE3O43900 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRICKLE3O43900 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.82■□□□□ 0.6
PRICKLE3O43900 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRICKLE3O43900 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRICKLE3O43900 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.82■□□□□ 0.6
PRICKLE3O43900 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRICKLE3O43900 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRICKLE3O43900 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRICKLE3O43900 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRICKLE3O43900 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PRICKLE3O43900 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRICKLE3O43900 RPS2P55-201ENST00000397318 883 ntBASIC18.82■□□□□ 0.6
PRICKLE3O43900 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.82■□□□□ 0.6
PRICKLE3O43900 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRICKLE3O43900 AC107956.1-201ENST00000494359 873 ntBASIC18.82■□□□□ 0.6
PRICKLE3O43900 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.82■□□□□ 0.6
PRICKLE3O43900 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.82■□□□□ 0.6
PRICKLE3O43900 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.82■□□□□ 0.6
PRICKLE3O43900 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.82■□□□□ 0.6
PRICKLE3O43900 AC233702.5-201ENST00000584107 538 ntBASIC18.82■□□□□ 0.6
PRICKLE3O43900 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRICKLE3O43900 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms