Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.94■□□□□ 0.46
IDH3BO43837 AC137761.2-201ENST00000561729 223 ntBASIC17.94■□□□□ 0.46
IDH3BO43837 AC145350.3-201ENST00000569033 163 ntBASIC17.94■□□□□ 0.46
IDH3BO43837 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.94■□□□□ 0.46
IDH3BO43837 AC009237.14-201ENST00000609975 1594 ntBASIC17.94■□□□□ 0.46
IDH3BO43837 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IDH3BO43837 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IDH3BO43837 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IDH3BO43837 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.94■□□□□ 0.46
IDH3BO43837 PTBP1P-201ENST00000554374 1601 ntBASIC17.94■□□□□ 0.46
IDH3BO43837 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
IDH3BO43837 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
IDH3BO43837 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IDH3BO43837 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IDH3BO43837 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
IDH3BO43837 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IDH3BO43837 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
IDH3BO43837 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.93■□□□□ 0.46
IDH3BO43837 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IDH3BO43837 AC007613.1-201ENST00000572811 2597 ntBASIC17.93■□□□□ 0.46
IDH3BO43837 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.93■□□□□ 0.46
IDH3BO43837 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.93■□□□□ 0.46
IDH3BO43837 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IDH3BO43837 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.93■□□□□ 0.46
IDH3BO43837 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IDH3BO43837 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
IDH3BO43837 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.93■□□□□ 0.46
IDH3BO43837 KRT16P6-202ENST00000425692 1426 ntBASIC17.93■□□□□ 0.46
IDH3BO43837 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IDH3BO43837 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IDH3BO43837 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.93■□□□□ 0.46
IDH3BO43837 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.93■□□□□ 0.46
IDH3BO43837 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IDH3BO43837 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IDH3BO43837 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IDH3BO43837 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IDH3BO43837 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.93■□□□□ 0.46
IDH3BO43837 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IDH3BO43837 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IDH3BO43837 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
IDH3BO43837 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
IDH3BO43837 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IDH3BO43837 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
IDH3BO43837 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IDH3BO43837 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.92■□□□□ 0.46
IDH3BO43837 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
IDH3BO43837 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IDH3BO43837 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IDH3BO43837 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
IDH3BO43837 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
IDH3BO43837 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IDH3BO43837 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
IDH3BO43837 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
IDH3BO43837 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.92■□□□□ 0.46
IDH3BO43837 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IDH3BO43837 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.92■□□□□ 0.46
IDH3BO43837 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
IDH3BO43837 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IDH3BO43837 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IDH3BO43837 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
IDH3BO43837 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.92■□□□□ 0.46
IDH3BO43837 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.92■□□□□ 0.46
IDH3BO43837 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.92■□□□□ 0.46
IDH3BO43837 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IDH3BO43837 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
IDH3BO43837 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IDH3BO43837 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.92■□□□□ 0.46
IDH3BO43837 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IDH3BO43837 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
IDH3BO43837 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IDH3BO43837 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IDH3BO43837 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.92■□□□□ 0.46
IDH3BO43837 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IDH3BO43837 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.91■□□□□ 0.46
IDH3BO43837 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IDH3BO43837 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.91■□□□□ 0.46
IDH3BO43837 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
IDH3BO43837 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IDH3BO43837 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IDH3BO43837 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
IDH3BO43837 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
IDH3BO43837 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IDH3BO43837 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
IDH3BO43837 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IDH3BO43837 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IDH3BO43837 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.91■□□□□ 0.46
IDH3BO43837 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
IDH3BO43837 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.91■□□□□ 0.46
IDH3BO43837 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IDH3BO43837 AL031963.3-201ENST00000606441 850 ntBASIC17.91■□□□□ 0.46
IDH3BO43837 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.91■□□□□ 0.46
IDH3BO43837 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
IDH3BO43837 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IDH3BO43837 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
IDH3BO43837 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IDH3BO43837 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IDH3BO43837 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
IDH3BO43837 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IDH3BO43837 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
IDH3BO43837 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms