Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF13O43567 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF13O43567 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF13O43567 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF13O43567 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF13O43567 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF13O43567 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF13O43567 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF13O43567 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF13O43567 DUSP5P2-201ENST00000426873 1033 ntBASIC17.81■□□□□ 0.44
RNF13O43567 NCF1B-203ENST00000435988 1254 ntBASIC17.81■□□□□ 0.44
RNF13O43567 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.81■□□□□ 0.44
RNF13O43567 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF13O43567 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF13O43567 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF13O43567 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
RNF13O43567 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RNF13O43567 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF13O43567 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF13O43567 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF13O43567 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF13O43567 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF13O43567 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF13O43567 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF13O43567 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF13O43567 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF13O43567 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF13O43567 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF13O43567 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF13O43567 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF13O43567 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF13O43567 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF13O43567 AC009237.14-201ENST00000609975 1594 ntBASIC17.8■□□□□ 0.44
RNF13O43567 AP001271.2-201ENST00000624018 1556 ntBASIC17.8■□□□□ 0.44
RNF13O43567 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF13O43567 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF13O43567 AL390719.1-204ENST00000412397 1219 ntBASIC17.8■□□□□ 0.44
RNF13O43567 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF13O43567 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF13O43567 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF13O43567 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF13O43567 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF13O43567 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF13O43567 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF13O43567 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RNF13O43567 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF13O43567 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF13O43567 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF13O43567 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF13O43567 PHGDH-210ENST00000641115 1638 ntBASIC17.8■□□□□ 0.44
RNF13O43567 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RNF13O43567 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF13O43567 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF13O43567 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF13O43567 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF13O43567 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
RNF13O43567 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF13O43567 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF13O43567 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF13O43567 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF13O43567 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF13O43567 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RNF13O43567 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RNF13O43567 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF13O43567 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RNF13O43567 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF13O43567 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RNF13O43567 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF13O43567 TSPY6P-201ENST00000448518 926 ntBASIC17.79■□□□□ 0.44
RNF13O43567 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF13O43567 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
RNF13O43567 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF13O43567 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
RNF13O43567 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.79■□□□□ 0.44
RNF13O43567 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RNF13O43567 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF13O43567 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF13O43567 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF13O43567 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RNF13O43567 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF13O43567 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RNF13O43567 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF13O43567 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF13O43567 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF13O43567 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF13O43567 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF13O43567 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF13O43567 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF13O43567 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF13O43567 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF13O43567 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF13O43567 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF13O43567 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF13O43567 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF13O43567 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF13O43567 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF13O43567 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF13O43567 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF13O43567 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF13O43567 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms