Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CHD1O14646 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC31.92■■■□□ 2.7
CHD1O14646 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC31.92■■■□□ 2.7
CHD1O14646 AC092597.1-201ENST00000487352 616 ntBASIC31.92■■■□□ 2.7
CHD1O14646 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC31.92■■■□□ 2.7
CHD1O14646 AC242852.2-201ENST00000615738 1807 ntBASIC31.92■■■□□ 2.7
CHD1O14646 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CHD1O14646 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CHD1O14646 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CHD1O14646 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CHD1O14646 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CHD1O14646 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
CHD1O14646 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
CHD1O14646 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC31.92■■■□□ 2.7
CHD1O14646 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CHD1O14646 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC31.92■■■□□ 2.7
CHD1O14646 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
CHD1O14646 HLA-A-201ENST00000376802 1334 ntBASIC31.91■■■□□ 2.7
CHD1O14646 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC31.91■■■□□ 2.7
CHD1O14646 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
CHD1O14646 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CHD1O14646 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC31.91■■■□□ 2.7
CHD1O14646 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC31.91■■■□□ 2.7
CHD1O14646 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC31.91■■■□□ 2.7
CHD1O14646 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC31.91■■■□□ 2.7
CHD1O14646 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC31.91■■■□□ 2.7
CHD1O14646 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
CHD1O14646 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CHD1O14646 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CHD1O14646 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
CHD1O14646 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CHD1O14646 PMS2P1-201ENST00000431037 1228 ntBASIC31.9■■■□□ 2.7
CHD1O14646 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CHD1O14646 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC31.9■■■□□ 2.7
CHD1O14646 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC31.9■■■□□ 2.7
CHD1O14646 AC012615.1-201ENST00000565797 1299 ntBASIC31.9■■■□□ 2.7
CHD1O14646 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
CHD1O14646 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
CHD1O14646 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CHD1O14646 DYM-203ENST00000442713 2147 ntTSL 2 BASIC31.9■■■□□ 2.7
CHD1O14646 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
CHD1O14646 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC31.9■■■□□ 2.7
CHD1O14646 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CHD1O14646 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC31.89■■■□□ 2.7
CHD1O14646 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
CHD1O14646 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC31.89■■■□□ 2.7
CHD1O14646 RASA4DP-201ENST00000460726 1199 ntBASIC31.89■■■□□ 2.7
CHD1O14646 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CHD1O14646 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
CHD1O14646 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CHD1O14646 PHGDH-210ENST00000641115 1638 ntBASIC31.89■■■□□ 2.7
CHD1O14646 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
CHD1O14646 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
CHD1O14646 CHCHD2P8-201ENST00000429873 447 ntBASIC31.89■■■□□ 2.69
CHD1O14646 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC31.89■■■□□ 2.69
CHD1O14646 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC31.89■■■□□ 2.69
CHD1O14646 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
CHD1O14646 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC31.89■■■□□ 2.69
CHD1O14646 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC31.89■■■□□ 2.69
CHD1O14646 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
CHD1O14646 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CHD1O14646 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC31.88■■■□□ 2.69
CHD1O14646 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CHD1O14646 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC31.88■■■□□ 2.69
CHD1O14646 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CHD1O14646 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC31.88■■■□□ 2.69
CHD1O14646 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC31.88■■■□□ 2.69
CHD1O14646 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC31.88■■■□□ 2.69
CHD1O14646 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC31.88■■■□□ 2.69
CHD1O14646 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
CHD1O14646 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
CHD1O14646 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CHD1O14646 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CHD1O14646 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CHD1O14646 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC31.87■■■□□ 2.69
CHD1O14646 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC31.87■■■□□ 2.69
CHD1O14646 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
CHD1O14646 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CHD1O14646 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CHD1O14646 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CHD1O14646 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC31.87■■■□□ 2.69
CHD1O14646 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC31.87■■■□□ 2.69
CHD1O14646 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC31.86■■■□□ 2.69
CHD1O14646 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CHD1O14646 TEX30-205ENST00000376029 959 ntTSL 2 BASIC31.86■■■□□ 2.69
CHD1O14646 HMGN1P19-201ENST00000436976 333 ntBASIC31.86■■■□□ 2.69
CHD1O14646 NUS1P1-201ENST00000446295 882 ntBASIC31.86■■■□□ 2.69
CHD1O14646 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC31.86■■■□□ 2.69
CHD1O14646 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC31.86■■■□□ 2.69
CHD1O14646 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC31.86■■■□□ 2.69
CHD1O14646 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC31.86■■■□□ 2.69
CHD1O14646 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CHD1O14646 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC31.86■■■□□ 2.69
CHD1O14646 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
CHD1O14646 AL662844.1-201ENST00000546340 181 ntBASIC31.86■■■□□ 2.69
CHD1O14646 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC31.86■■■□□ 2.69
CHD1O14646 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CHD1O14646 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CHD1O14646 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC31.85■■■□□ 2.69
CHD1O14646 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC31.85■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms