Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.15■□□□□ 0.66
TAF4O00268 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TAF4O00268 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TAF4O00268 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.66
TAF4O00268 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TAF4O00268 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.14■□□□□ 0.66
TAF4O00268 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TAF4O00268 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TAF4O00268 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.14■□□□□ 0.65
TAF4O00268 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TAF4O00268 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TAF4O00268 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TAF4O00268 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TAF4O00268 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TAF4O00268 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TAF4O00268 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TAF4O00268 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TAF4O00268 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TAF4O00268 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.14■□□□□ 0.65
TAF4O00268 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TAF4O00268 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.14■□□□□ 0.65
TAF4O00268 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TAF4O00268 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TAF4O00268 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TAF4O00268 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TAF4O00268 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TAF4O00268 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
TAF4O00268 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TAF4O00268 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TAF4O00268 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TAF4O00268 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.14■□□□□ 0.65
TAF4O00268 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
TAF4O00268 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TAF4O00268 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TAF4O00268 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.13■□□□□ 0.65
TAF4O00268 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TAF4O00268 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TAF4O00268 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.13■□□□□ 0.65
TAF4O00268 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.13■□□□□ 0.65
TAF4O00268 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.13■□□□□ 0.65
TAF4O00268 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.13■□□□□ 0.65
TAF4O00268 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.13■□□□□ 0.65
TAF4O00268 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TAF4O00268 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.13■□□□□ 0.65
TAF4O00268 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TAF4O00268 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TAF4O00268 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.13■□□□□ 0.65
TAF4O00268 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.13■□□□□ 0.65
TAF4O00268 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TAF4O00268 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TAF4O00268 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.13■□□□□ 0.65
TAF4O00268 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TAF4O00268 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
TAF4O00268 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TAF4O00268 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TAF4O00268 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TAF4O00268 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.12■□□□□ 0.65
TAF4O00268 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TAF4O00268 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TAF4O00268 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TAF4O00268 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.12■□□□□ 0.65
TAF4O00268 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.12■□□□□ 0.65
TAF4O00268 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TAF4O00268 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TAF4O00268 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.12■□□□□ 0.65
TAF4O00268 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.12■□□□□ 0.65
TAF4O00268 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TAF4O00268 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.12■□□□□ 0.65
TAF4O00268 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.12■□□□□ 0.65
TAF4O00268 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
TAF4O00268 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.12■□□□□ 0.65
TAF4O00268 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TAF4O00268 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.12■□□□□ 0.65
TAF4O00268 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TAF4O00268 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.11■□□□□ 0.65
TAF4O00268 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TAF4O00268 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TAF4O00268 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TAF4O00268 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TAF4O00268 NBPF21P-201ENST00000425093 1451 ntBASIC19.11■□□□□ 0.65
TAF4O00268 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TAF4O00268 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TAF4O00268 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TAF4O00268 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.11■□□□□ 0.65
TAF4O00268 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.11■□□□□ 0.65
TAF4O00268 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TAF4O00268 LIN28AP1-201ENST00000429574 405 ntBASIC19.11■□□□□ 0.65
TAF4O00268 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.11■□□□□ 0.65
TAF4O00268 AC009947.2-201ENST00000444014 672 ntBASIC19.11■□□□□ 0.65
TAF4O00268 AC116562.2-201ENST00000507042 360 ntBASIC19.11■□□□□ 0.65
TAF4O00268 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TAF4O00268 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.11■□□□□ 0.65
TAF4O00268 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TAF4O00268 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.11■□□□□ 0.65
TAF4O00268 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TAF4O00268 AC027702.1-201ENST00000563810 1770 ntBASIC19.11■□□□□ 0.65
TAF4O00268 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TAF4O00268 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
TAF4O00268 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TAF4O00268 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms