Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.85■□□□□ 0.93
RCCD1A6NED2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.85■□□□□ 0.93
RCCD1A6NED2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RCCD1A6NED2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RCCD1A6NED2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RCCD1A6NED2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RCCD1A6NED2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RCCD1A6NED2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.85■□□□□ 0.93
RCCD1A6NED2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RCCD1A6NED2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RCCD1A6NED2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RCCD1A6NED2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RCCD1A6NED2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RCCD1A6NED2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RCCD1A6NED2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RCCD1A6NED2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RCCD1A6NED2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RCCD1A6NED2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RCCD1A6NED2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RCCD1A6NED2 AC093787.1-201ENST00000450396 207 ntBASIC20.84■□□□□ 0.93
RCCD1A6NED2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.84■□□□□ 0.93
RCCD1A6NED2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.84■□□□□ 0.93
RCCD1A6NED2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.84■□□□□ 0.93
RCCD1A6NED2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.84■□□□□ 0.93
RCCD1A6NED2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.84■□□□□ 0.93
RCCD1A6NED2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.84■□□□□ 0.93
RCCD1A6NED2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.84■□□□□ 0.93
RCCD1A6NED2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RCCD1A6NED2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RCCD1A6NED2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RCCD1A6NED2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RCCD1A6NED2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RCCD1A6NED2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RCCD1A6NED2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.84■□□□□ 0.93
RCCD1A6NED2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RCCD1A6NED2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RCCD1A6NED2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RCCD1A6NED2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RCCD1A6NED2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RCCD1A6NED2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RCCD1A6NED2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.93
RCCD1A6NED2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.83■□□□□ 0.93
RCCD1A6NED2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RCCD1A6NED2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RCCD1A6NED2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
RCCD1A6NED2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.83■□□□□ 0.93
RCCD1A6NED2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.83■□□□□ 0.93
RCCD1A6NED2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.83■□□□□ 0.93
RCCD1A6NED2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RCCD1A6NED2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RCCD1A6NED2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.83■□□□□ 0.93
RCCD1A6NED2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RCCD1A6NED2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RCCD1A6NED2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.83■□□□□ 0.93
RCCD1A6NED2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RCCD1A6NED2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.83■□□□□ 0.93
RCCD1A6NED2 BID-214ENST00000617586 542 ntTSL 5 BASIC20.83■□□□□ 0.93
RCCD1A6NED2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.83■□□□□ 0.93
RCCD1A6NED2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RCCD1A6NED2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
RCCD1A6NED2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.83■□□□□ 0.92
RCCD1A6NED2 AC116351.2-201ENST00000606540 1585 ntBASIC20.83■□□□□ 0.92
RCCD1A6NED2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.83■□□□□ 0.92
RCCD1A6NED2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
RCCD1A6NED2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.83■□□□□ 0.92
RCCD1A6NED2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.83■□□□□ 0.92
RCCD1A6NED2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.83■□□□□ 0.92
RCCD1A6NED2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RCCD1A6NED2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RCCD1A6NED2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RCCD1A6NED2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
RCCD1A6NED2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RCCD1A6NED2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RCCD1A6NED2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.82■□□□□ 0.92
RCCD1A6NED2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.82■□□□□ 0.92
RCCD1A6NED2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RCCD1A6NED2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RCCD1A6NED2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.82■□□□□ 0.92
RCCD1A6NED2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.82■□□□□ 0.92
RCCD1A6NED2 AC069236.1-201ENST00000604339 616 ntBASIC20.82■□□□□ 0.92
RCCD1A6NED2 AL589743.5-201ENST00000616611 1050 ntBASIC20.82■□□□□ 0.92
RCCD1A6NED2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.82■□□□□ 0.92
RCCD1A6NED2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RCCD1A6NED2 AC141586.3-201ENST00000562166 1838 ntBASIC20.82■□□□□ 0.92
RCCD1A6NED2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RCCD1A6NED2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RCCD1A6NED2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RCCD1A6NED2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.82■□□□□ 0.92
RCCD1A6NED2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RCCD1A6NED2 AC009113.1-201ENST00000570267 2443 ntBASIC20.82■□□□□ 0.92
RCCD1A6NED2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RCCD1A6NED2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.81■□□□□ 0.92
RCCD1A6NED2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
RCCD1A6NED2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.81■□□□□ 0.92
RCCD1A6NED2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RCCD1A6NED2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RCCD1A6NED2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.81■□□□□ 0.92
RCCD1A6NED2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RCCD1A6NED2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RCCD1A6NED2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms