Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 EEF1A1P11-201ENST00000415278 1389 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 CEACAM5-208ENST00000615021 1694 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AC022031.1-201ENST00000585985 2593 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 GTF2IP1-202ENST00000614592 2047 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AC006026.1-201ENST00000444025 1803 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 CD86-209ENST00000493101 1572 ntTSL 2 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 RNY4P34-201ENST00000364779 95 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 ADIG-201ENST00000373348 430 ntTSL 2 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 RNU6-878P-201ENST00000384578 110 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 MIR320C1-201ENST00000408566 88 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AMD1P2-201ENST00000412936 992 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 SDCBPP3-201ENST00000419629 891 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 ELOBP4-201ENST00000423418 296 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AC068137.1-201ENST00000429272 584 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AC108448.2-201ENST00000431546 730 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 NEFLP1-201ENST00000436364 984 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 FDPSP8-201ENST00000438304 1089 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AC002486.2-201ENST00000447806 590 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 GAS5-219ENST00000449289 542 ntTSL 3 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 C1DP4-201ENST00000455429 424 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AC099563.1-201ENST00000456086 418 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 RN7SL333P-201ENST00000476398 297 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AC017015.1-201ENST00000477387 286 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AC007182.2-201ENST00000489251 402 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 MTCO3P9-201ENST00000506989 781 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AF186996.3-201ENST00000509527 964 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 RNU7-179P-201ENST00000516608 68 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AF279873.1-201ENST00000523393 313 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 OR5AN2P-201ENST00000534535 896 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AL121594.2-201ENST00000541658 472 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AC011840.5-201ENST00000582125 771 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 VN1R84P-201ENST00000593697 235 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 AC012213.2-201ENST00000562917 4597 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 MRE11P1-201ENST00000464884 2127 ntBASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
DEPDC4Q8N2C3 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms