RNA–Protein interactions for RNA: ENST00000384578.1

RNU6-878P-201, Transcript of RNA, U6 small nuclear 878, pseudogene, humanhuman

BASIC

Gene RNU6-878P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-878P-201ENST00000384578 AEBP2Q6ZN18 517 aaPredicted RBP21.97■■□□□ 1.11
RNU6-878P-201ENST00000384578 CHIC1Q5VXU3 224 aa20.96■□□□□ 0.95
RNU6-878P-201ENST00000384578 SENP3Q9H4L4 574 aaPredicted RBP18.58■□□□□ 0.56
RNU6-878P-201ENST00000384578 PHF23Q9BUL5 403 aaPredicted RBP18.48■□□□□ 0.55
RNU6-878P-201ENST00000384578 FOXD1Q16676 465 aa17.38■□□□□ 0.37
RNU6-878P-201ENST00000384578 PLPPR3Q6T4P5 718 aa16.8■□□□□ 0.28
RNU6-878P-201ENST00000384578 PPP6R1Q9UPN7 881 aa16.46■□□□□ 0.23
RNU6-878P-201ENST00000384578 ADRA2BP18089 450 aa16.4■□□□□ 0.22
RNU6-878P-201ENST00000384578 PIAS4Q8N2W9 510 aaPredicted RBP16.26■□□□□ 0.19
RNU6-878P-201ENST00000384578 MSH5O43196 834 aa16.07■□□□□ 0.16
RNU6-878P-201ENST00000384578 POTEDQ86YR6 584 aa15.45■□□□□ 0.06
RNU6-878P-201ENST00000384578 MAPK8IP2Q13387 824 aaPredicted RBP15.03■□□□□ -0
RNU6-878P-201ENST00000384578 SCAF1Q9H7N4 1312 aaKnown RBP14.84□□□□□ -0.03
RNU6-878P-201ENST00000384578 PPP4R3CPQ6ZMV5 832 aa14.8□□□□□ -0.04
RNU6-878P-201ENST00000384578 DMRT2Q9Y5R5 561 aa14.8□□□□□ -0.04
RNU6-878P-201ENST00000384578 CNKSR2Q8WXI2 1034 aa14.43□□□□□ -0.1
RNU6-878P-201ENST00000384578 HOXD11P31277 338 aaPredicted RBP14.31□□□□□ -0.12
RNU6-878P-201ENST00000384578 RNF216Q9NWF9 866 aaPredicted RBP14.25□□□□□ -0.13
RNU6-878P-201ENST00000384578 DCAF8L1A6NGE4 600 aa14.21□□□□□ -0.13
RNU6-878P-201ENST00000384578 NCBP3Q53F19 620 aaKnown RBP14.2□□□□□ -0.14
RNU6-878P-201ENST00000384578 NPM3O75607 178 aaKnown RBP14.12□□□□□ -0.15
RNU6-878P-201ENST00000384578 KCNA4P22459 653 aa14.06□□□□□ -0.16
RNU6-878P-201ENST00000384578 RNF39Q9H2S5 420 aa13.8□□□□□ -0.2
RNU6-878P-201ENST00000384578 CACNB1Q02641 598 aaPredicted RBP13.71□□□□□ -0.21
RNU6-878P-201ENST00000384578 DNAJC5BQ9UF47 199 aa13.69□□□□□ -0.22
RNU6-878P-201ENST00000384578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.65□□□□□ -0.22
RNU6-878P-201ENST00000384578 C1QBPQ07021 282 aaKnown RBP13.55□□□□□ -0.24
RNU6-878P-201ENST00000384578 SLC4A2P04920 1241 aa13.45□□□□□ -0.26
RNU6-878P-201ENST00000384578 U3KPZ7 1027 aaPredicted RBP13.43□□□□□ -0.26
RNU6-878P-201ENST00000384578 SLC4A1APQ9BWU0 796 aaKnown RBP13.25□□□□□ -0.29
RNU6-878P-201ENST00000384578 SPINK5Q9NQ38 1064 aaPredicted RBP13.21□□□□□ -0.29
RNU6-878P-201ENST00000384578 CAPN15O75808 1086 aa13.11□□□□□ -0.31
RNU6-878P-201ENST00000384578 DSG3P32926 999 aa13□□□□□ -0.33
RNU6-878P-201ENST00000384578 MYCNP04198 464 aaPredicted RBP12.99□□□□□ -0.33
RNU6-878P-201ENST00000384578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.98□□□□□ -0.33
RNU6-878P-201ENST00000384578 ZBTB22O15209 634 aa12.98□□□□□ -0.33
RNU6-878P-201ENST00000384578 HNRNPUL2Q1KMD3 747 aaKnown RBP12.98□□□□□ -0.33
RNU6-878P-201ENST00000384578 TRHP20396 242 aaPredicted RBP12.97□□□□□ -0.33
RNU6-878P-201ENST00000384578 FOXD4L1Q9NU39 408 aa12.97□□□□□ -0.33
RNU6-878P-201ENST00000384578 SAMD1Q6SPF0 538 aaPredicted RBP12.95□□□□□ -0.34
RNU6-878P-201ENST00000384578 APLP2Q06481 763 aa12.9□□□□□ -0.34
RNU6-878P-201ENST00000384578 ABCB7O75027 752 aa12.89□□□□□ -0.35
RNU6-878P-201ENST00000384578 ZNF219Q9P2Y4 722 aaPredicted RBP12.87□□□□□ -0.35
RNU6-878P-201ENST00000384578 ATF5Q9Y2D1 282 aaPredicted RBP12.8□□□□□ -0.36
RNU6-878P-201ENST00000384578 POLA2Q14181 598 aa12.67□□□□□ -0.38
RNU6-878P-201ENST00000384578 CSRNP3Q8WYN3 585 aa12.52□□□□□ -0.41
RNU6-878P-201ENST00000384578 ATXN8OSP0DMR3 200 aa12.5□□□□□ -0.41
RNU6-878P-201ENST00000384578 EHMT2Q96KQ7 1210 aa12.49□□□□□ -0.41
RNU6-878P-201ENST00000384578 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
RNU6-878P-201ENST00000384578 RBM42Q9BTD8 480 aaKnown RBP12.29□□□□□ -0.44
RNU6-878P-201ENST00000384578 OSCARQ8IYS5 282 aa12.28□□□□□ -0.44
RNU6-878P-201ENST00000384578 MKRN4PQ13434 485 aaPredicted RBP12.2□□□□□ -0.46
RNU6-878P-201ENST00000384578 FBLN2P98095 1184 aa12.14□□□□□ -0.47
RNU6-878P-201ENST00000384578 POTEHQ6S545 545 aa12.12□□□□□ -0.47
RNU6-878P-201ENST00000384578 AKT1S1Q96B36 256 aa12.09□□□□□ -0.47
RNU6-878P-201ENST00000384578 REM2Q8IYK8 340 aaPredicted RBP12.04□□□□□ -0.48
RNU6-878P-201ENST00000384578 CHRDL2Q6WN34 429 aa12.03□□□□□ -0.48
RNU6-878P-201ENST00000384578 SPDYE2BA6NHP3 402 aa11.99□□□□□ -0.49
RNU6-878P-201ENST00000384578 SPDYE6P0CI01 402 aa11.99□□□□□ -0.49
RNU6-878P-201ENST00000384578 SPDYE2Q495Y8 402 aa11.99□□□□□ -0.49
RNU6-878P-201ENST00000384578 PITPNM1O00562 1244 aa11.93□□□□□ -0.5
RNU6-878P-201ENST00000384578 ZNF692Q9BU19 519 aaPredicted RBP11.92□□□□□ -0.5
RNU6-878P-201ENST00000384578 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
RNU6-878P-201ENST00000384578 PIP4P2Q8N4L2 257 aa11.81□□□□□ -0.52
RNU6-878P-201ENST00000384578 PABPN1Q86U42 306 aaKnown RBP eCLIP11.77□□□□□ -0.53
RNU6-878P-201ENST00000384578 CLEC11AQ9Y240 323 aa11.76□□□□□ -0.53
RNU6-878P-201ENST00000384578 FXR2P51116 673 aaKnown RBP eCLIP11.75□□□□□ -0.53
RNU6-878P-201ENST00000384578 SPDYE1Q8NFV5 336 aaPredicted RBP11.73□□□□□ -0.53
RNU6-878P-201ENST00000384578 SPDYE4A6NLX3 237 aa11.66□□□□□ -0.54
RNU6-878P-201ENST00000384578 PRKAR2AP13861 404 aaKnown RBP11.6□□□□□ -0.55
RNU6-878P-201ENST00000384578 CHADLQ6NUI6 762 aa11.57□□□□□ -0.56
RNU6-878P-201ENST00000384578 PRR29P0C7W0 189 aa11.56□□□□□ -0.56
RNU6-878P-201ENST00000384578 HAX1O00165 279 aa11.52□□□□□ -0.57
RNU6-878P-201ENST00000384578 EVX2Q03828 476 aa11.49□□□□□ -0.57
RNU6-878P-201ENST00000384578 SP7Q8TDD2 431 aaPredicted RBP11.44□□□□□ -0.58
RNU6-878P-201ENST00000384578 PROM2Q8N271 834 aa11.42□□□□□ -0.58
RNU6-878P-201ENST00000384578 STAG3Q9UJ98 1225 aa11.39□□□□□ -0.59
RNU6-878P-201ENST00000384578 CREBZFQ9NS37 354 aa11.38□□□□□ -0.59
RNU6-878P-201ENST00000384578 C19orf67A6NJJ6 358 aa11.37□□□□□ -0.59
RNU6-878P-201ENST00000384578 FARP1Q9Y4F1 1045 aaPredicted RBP11.36□□□□□ -0.59
RNU6-878P-201ENST00000384578 FKBP8Q14318 412 aa11.32□□□□□ -0.6
RNU6-878P-201ENST00000384578 CD44P16070 742 aaKnown RBP11.24□□□□□ -0.61
RNU6-878P-201ENST00000384578 MNX1P50219 401 aaPredicted RBP11.22□□□□□ -0.61
RNU6-878P-201ENST00000384578 GABBR2O75899 941 aa11.16□□□□□ -0.62
RNU6-878P-201ENST00000384578 ZRANB1Q9UGI0 708 aa11.11□□□□□ -0.63
RNU6-878P-201ENST00000384578 MIER1Q8N108 512 aa11.1□□□□□ -0.63
RNU6-878P-201ENST00000384578 NPM1P06748 294 aaKnown RBP eCLIP11.07□□□□□ -0.64
RNU6-878P-201ENST00000384578 ZNF579Q8NAF0 562 aaKnown RBP11.05□□□□□ -0.64
RNU6-878P-201ENST00000384578 PHF12Q96QT6 1004 aa11.03□□□□□ -0.64
RNU6-878P-201ENST00000384578 PLCD3Q8N3E9 789 aa11.02□□□□□ -0.65
RNU6-878P-201ENST00000384578 PAK3O75914 559 aaPredicted RBP10.99□□□□□ -0.65
RNU6-878P-201ENST00000384578 POTEIP0CG38 1075 aa10.98□□□□□ -0.65
RNU6-878P-201ENST00000384578 TSPYL2Q9H2G4 693 aaPredicted RBP10.98□□□□□ -0.65
RNU6-878P-201ENST00000384578 GALR2O43603 387 aaPredicted RBP10.97□□□□□ -0.65
RNU6-878P-201ENST00000384578 PLEKHG5O94827 1062 aa10.96□□□□□ -0.65
RNU6-878P-201ENST00000384578 RASEFQ8IZ41 740 aa10.96□□□□□ -0.65
RNU6-878P-201ENST00000384578 FBXO3Q9UK99 471 aa10.92□□□□□ -0.66
RNU6-878P-201ENST00000384578 CCDC61Q9Y6R9 512 aa10.91□□□□□ -0.66
RNU6-878P-201ENST00000384578 CLCN6P51797 869 aa10.9□□□□□ -0.66
RNU6-878P-201ENST00000384578 NUBP1P53384 320 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 495.7 ms