RNA–Protein interactions for RNA: ENST00000379997.7

C9orf72-202, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2 BASIC

Gene C9orf72, Length 1,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-202ENST00000379997 AEBP2Q6ZN18 517 aaPredicted RBP20.44■□□□□ 0.86
C9orf72-202ENST00000379997 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
C9orf72-202ENST00000379997 SENP3Q9H4L4 574 aaPredicted RBP17.55■□□□□ 0.4
C9orf72-202ENST00000379997 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
C9orf72-202ENST00000379997 POTEDQ86YR6 584 aa16.56■□□□□ 0.24
C9orf72-202ENST00000379997 FOXD1Q16676 465 aa16.46■□□□□ 0.23
C9orf72-202ENST00000379997 MSH5O43196 834 aa15.68■□□□□ 0.1
C9orf72-202ENST00000379997 PIAS4Q8N2W9 510 aaPredicted RBP15.22■□□□□ 0.03
C9orf72-202ENST00000379997 PPP6R1Q9UPN7 881 aa14.83□□□□□ -0.04
C9orf72-202ENST00000379997 ADRA2BP18089 450 aa14.76□□□□□ -0.05
C9orf72-202ENST00000379997 PLPPR3Q6T4P5 718 aa14.61□□□□□ -0.07
C9orf72-202ENST00000379997 CACNB1Q02641 598 aaPredicted RBP13.95□□□□□ -0.18
C9orf72-202ENST00000379997 DMRT2Q9Y5R5 561 aa13.79□□□□□ -0.2
C9orf72-202ENST00000379997 MAPK8IP2Q13387 824 aaPredicted RBP13.78□□□□□ -0.2
C9orf72-202ENST00000379997 SCAF1Q9H7N4 1312 aaKnown RBP13.51□□□□□ -0.25
C9orf72-202ENST00000379997 DCAF8L1A6NGE4 600 aa13.36□□□□□ -0.27
C9orf72-202ENST00000379997 RNF39Q9H2S5 420 aa13.3□□□□□ -0.28
C9orf72-202ENST00000379997 C1QBPQ07021 282 aaKnown RBP13.07□□□□□ -0.32
C9orf72-202ENST00000379997 HOXD11P31277 338 aaPredicted RBP12.99□□□□□ -0.33
C9orf72-202ENST00000379997 POTEHQ6S545 545 aa12.85□□□□□ -0.35
C9orf72-202ENST00000379997 PPP4R3CPQ6ZMV5 832 aa12.73□□□□□ -0.37
C9orf72-202ENST00000379997 RNF216Q9NWF9 866 aaPredicted RBP12.71□□□□□ -0.37
C9orf72-202ENST00000379997 DNAJC5BQ9UF47 199 aa12.65□□□□□ -0.38
C9orf72-202ENST00000379997 CNKSR2Q8WXI2 1034 aa12.65□□□□□ -0.38
C9orf72-202ENST00000379997 KCNA4P22459 653 aa12.54□□□□□ -0.4
C9orf72-202ENST00000379997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.43□□□□□ -0.42
C9orf72-202ENST00000379997 DSG3P32926 999 aa12.23□□□□□ -0.45
C9orf72-202ENST00000379997 EHMT2Q96KQ7 1210 aa12.22□□□□□ -0.45
C9orf72-202ENST00000379997 CAPN15O75808 1086 aa12.17□□□□□ -0.46
C9orf72-202ENST00000379997 SPINK5Q9NQ38 1064 aaPredicted RBP12.12□□□□□ -0.47
C9orf72-202ENST00000379997 U3KPZ7 1027 aaPredicted RBP12.05□□□□□ -0.48
C9orf72-202ENST00000379997 NCBP3Q53F19 620 aaKnown RBP12.02□□□□□ -0.49
C9orf72-202ENST00000379997 SLC4A1APQ9BWU0 796 aaKnown RBP11.95□□□□□ -0.5
C9orf72-202ENST00000379997 NPM3O75607 178 aaKnown RBP11.9□□□□□ -0.5
C9orf72-202ENST00000379997 CSRNP3Q8WYN3 585 aa11.86□□□□□ -0.51
C9orf72-202ENST00000379997 ABCB7O75027 752 aa11.81□□□□□ -0.52
C9orf72-202ENST00000379997 TRHP20396 242 aaPredicted RBP11.8□□□□□ -0.52
C9orf72-202ENST00000379997 CHRDL2Q6WN34 429 aa11.73□□□□□ -0.53
C9orf72-202ENST00000379997 ZNF219Q9P2Y4 722 aaPredicted RBP11.7□□□□□ -0.54
C9orf72-202ENST00000379997 SP7Q8TDD2 431 aaPredicted RBP11.69□□□□□ -0.54
C9orf72-202ENST00000379997 RBM42Q9BTD8 480 aaKnown RBP11.68□□□□□ -0.54
C9orf72-202ENST00000379997 APLP2Q06481 763 aa11.65□□□□□ -0.54
C9orf72-202ENST00000379997 ZBTB22O15209 634 aa11.59□□□□□ -0.55
C9orf72-202ENST00000379997 SLC4A2P04920 1241 aa11.48□□□□□ -0.57
C9orf72-202ENST00000379997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.46□□□□□ -0.57
C9orf72-202ENST00000379997 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.57
C9orf72-202ENST00000379997 SAMD1Q6SPF0 538 aaPredicted RBP11.36□□□□□ -0.59
C9orf72-202ENST00000379997 HAX1O00165 279 aa11.33□□□□□ -0.6
C9orf72-202ENST00000379997 FOXD4L1Q9NU39 408 aa11.32□□□□□ -0.6
C9orf72-202ENST00000379997 POLA2Q14181 598 aa11.29□□□□□ -0.6
C9orf72-202ENST00000379997 PIP4P2Q8N4L2 257 aa11.29□□□□□ -0.6
C9orf72-202ENST00000379997 AKT1S1Q96B36 256 aa11.25□□□□□ -0.61
C9orf72-202ENST00000379997 REM2Q8IYK8 340 aaPredicted RBP11.16□□□□□ -0.62
C9orf72-202ENST00000379997 EVX2Q03828 476 aa11.1□□□□□ -0.63
C9orf72-202ENST00000379997 FXR2P51116 673 aaKnown RBP eCLIP11.09□□□□□ -0.63
C9orf72-202ENST00000379997 PITPNM1O00562 1244 aa11.05□□□□□ -0.64
C9orf72-202ENST00000379997 LHX8Q68G74 356 aa10.97□□□□□ -0.65
C9orf72-202ENST00000379997 ZBTB12Q9Y330 459 aaPredicted RBP10.97□□□□□ -0.65
C9orf72-202ENST00000379997 MYCNP04198 464 aaPredicted RBP10.95□□□□□ -0.66
C9orf72-202ENST00000379997 OSCARQ8IYS5 282 aa10.95□□□□□ -0.66
C9orf72-202ENST00000379997 PLSCR2Q9NRY7 297 aa10.93□□□□□ -0.66
C9orf72-202ENST00000379997 ATXN8OSP0DMR3 200 aa10.82□□□□□ -0.68
C9orf72-202ENST00000379997 GABBR2O75899 941 aa10.81□□□□□ -0.68
C9orf72-202ENST00000379997 PRKAR2AP13861 404 aaKnown RBP10.78□□□□□ -0.68
C9orf72-202ENST00000379997 ATF5Q9Y2D1 282 aaPredicted RBP10.77□□□□□ -0.69
C9orf72-202ENST00000379997 C19orf67A6NJJ6 358 aa10.76□□□□□ -0.69
C9orf72-202ENST00000379997 FKBP8Q14318 412 aa10.66□□□□□ -0.7
C9orf72-202ENST00000379997 CLEC11AQ9Y240 323 aa10.66□□□□□ -0.7
C9orf72-202ENST00000379997 SPDYE1Q8NFV5 336 aaPredicted RBP10.59□□□□□ -0.71
C9orf72-202ENST00000379997 SPDYE2BA6NHP3 402 aa10.57□□□□□ -0.72
C9orf72-202ENST00000379997 SPDYE6P0CI01 402 aa10.57□□□□□ -0.72
C9orf72-202ENST00000379997 SPDYE2Q495Y8 402 aa10.57□□□□□ -0.72
C9orf72-202ENST00000379997 RTN4Q9NQC3 1192 aaKnown RBP10.57□□□□□ -0.72
C9orf72-202ENST00000379997 POTEIP0CG38 1075 aa10.55□□□□□ -0.72
C9orf72-202ENST00000379997 CHADLQ6NUI6 762 aa10.51□□□□□ -0.73
C9orf72-202ENST00000379997 AMER1Q5JTC6 1135 aaPredicted RBP10.44□□□□□ -0.74
C9orf72-202ENST00000379997 FBLN2P98095 1184 aa10.42□□□□□ -0.74
C9orf72-202ENST00000379997 CD44P16070 742 aaKnown RBP10.39□□□□□ -0.75
C9orf72-202ENST00000379997 DCBLD2Q96PD2 775 aa10.39□□□□□ -0.75
C9orf72-202ENST00000379997 POTEMA6NI47 508 aa10.38□□□□□ -0.75
C9orf72-202ENST00000379997 ZNF692Q9BU19 519 aaPredicted RBP10.37□□□□□ -0.75
C9orf72-202ENST00000379997 PRR29P0C7W0 189 aa10.36□□□□□ -0.75
C9orf72-202ENST00000379997 CLCN6P51797 869 aa10.36□□□□□ -0.75
C9orf72-202ENST00000379997 SSUH2Q9Y2M2 353 aa10.33□□□□□ -0.76
C9orf72-202ENST00000379997 POTEGQ6S5H5 508 aa10.32□□□□□ -0.76
C9orf72-202ENST00000379997 OTUD5Q96G74 571 aa10.32□□□□□ -0.76
C9orf72-202ENST00000379997 MKRN4PQ13434 485 aaPredicted RBP10.26□□□□□ -0.77
C9orf72-202ENST00000379997 FARP1Q9Y4F1 1045 aaPredicted RBP10.25□□□□□ -0.77
C9orf72-202ENST00000379997 SLC24A1O60721 1099 aa10.22□□□□□ -0.77
C9orf72-202ENST00000379997 PCDH10Q9P2E7 1040 aa10.21□□□□□ -0.77
C9orf72-202ENST00000379997 POTEB2H3BUK9 544 aa10.21□□□□□ -0.78
C9orf72-202ENST00000379997 PABPN1Q86U42 306 aaKnown RBP eCLIP10.19□□□□□ -0.78
C9orf72-202ENST00000379997 SPDYE4A6NLX3 237 aa10.18□□□□□ -0.78
C9orf72-202ENST00000379997 ZNF579Q8NAF0 562 aaKnown RBP10.16□□□□□ -0.78
C9orf72-202ENST00000379997 ZRANB1Q9UGI0 708 aa10.14□□□□□ -0.79
C9orf72-202ENST00000379997 GALR2O43603 387 aaPredicted RBP10.12□□□□□ -0.79
C9orf72-202ENST00000379997 PROM2Q8N271 834 aa10.08□□□□□ -0.8
C9orf72-202ENST00000379997 FBXO3Q9UK99 471 aa10.04□□□□□ -0.8
C9orf72-202ENST00000379997 PELP1Q8IZL8 1130 aaKnown RBP9.98□□□□□ -0.81
C9orf72-202ENST00000379997 VASPP50552 380 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms