Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 RNA5SP479-201ENST00000364858 117 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
COL18A1P39060 OR51B3P-201ENST00000412287 913 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 AC114755.2-201ENST00000413520 361 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 NIP7P2-201ENST00000485801 544 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 AC013356.1-201ENST00000489027 564 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 RPS12P31-201ENST00000491419 398 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.67□□□□□ -1.34
COL18A1P39060 OR8G5-201ENST00000524943 1041 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL18A1P39060 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL18A1P39060 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.67□□□□□ -1.34
COL18A1P39060 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.67□□□□□ -1.34
COL18A1P39060 AC010632.3-201ENST00000611377 369 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 AC245389.2-201ENST00000616023 576 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 MIR6133-201ENST00000617057 108 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 AC242843.1-201ENST00000618702 573 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 uc_338.7-201ENST00000621834 124 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.67□□□□□ -1.34
COL18A1P39060 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.67□□□□□ -1.34
COL18A1P39060 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL18A1P39060 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL18A1P39060 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
COL18A1P39060 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL18A1P39060 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.67□□□□□ -1.34
COL18A1P39060 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
COL18A1P39060 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
COL18A1P39060 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
COL18A1P39060 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL18A1P39060 ATP5HP3-201ENST00000396994 486 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 FABP7P1-201ENST00000424004 391 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 AC017019.1-201ENST00000426129 261 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 RPL7AP28-201ENST00000464513 571 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 RN7SL817P-201ENST00000480777 288 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 RN7SKP122-201ENST00000515923 296 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 SOX5P1-201ENST00000524155 1127 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 AC079064.1-201ENST00000528365 362 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 AL359757.1-201ENST00000623176 255 ntBASIC6.67□□□□□ -1.34
COL18A1P39060 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
COL18A1P39060 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.66□□□□□ -1.34
COL18A1P39060 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL18A1P39060 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL18A1P39060 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.66□□□□□ -1.34
COL18A1P39060 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL18A1P39060 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.66□□□□□ -1.34
COL18A1P39060 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
COL18A1P39060 OR4K15-201ENST00000305051 1216 ntBASIC6.66□□□□□ -1.34
COL18A1P39060 RNU4-25P-201ENST00000410569 230 ntBASIC6.66□□□□□ -1.34
COL18A1P39060 RN7SKP106-201ENST00000410832 272 ntBASIC6.66□□□□□ -1.34
COL18A1P39060 AC009480.2-201ENST00000422916 432 ntBASIC6.66□□□□□ -1.34
COL18A1P39060 AC111000.3-201ENST00000508057 576 ntBASIC6.66□□□□□ -1.34
COL18A1P39060 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.66□□□□□ -1.34
COL18A1P39060 RN7SKP248-201ENST00000516278 305 ntBASIC6.66□□□□□ -1.34
COL18A1P39060 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.66□□□□□ -1.34
COL18A1P39060 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.66□□□□□ -1.34
COL18A1P39060 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
COL18A1P39060 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
COL18A1P39060 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.66□□□□□ -1.34
COL18A1P39060 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL18A1P39060 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL18A1P39060 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
COL18A1P39060 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL18A1P39060 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.65□□□□□ -1.34
COL18A1P39060 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
COL18A1P39060 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
COL18A1P39060 RN7SKP145-201ENST00000363291 303 ntBASIC6.65□□□□□ -1.34
COL18A1P39060 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.65□□□□□ -1.34
COL18A1P39060 RPL12P43-201ENST00000420608 499 ntBASIC6.65□□□□□ -1.34
COL18A1P39060 AL645608.4-201ENST00000423619 154 ntBASIC6.65□□□□□ -1.34
COL18A1P39060 RPL23AP1-201ENST00000428990 471 ntBASIC6.65□□□□□ -1.34
COL18A1P39060 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.65□□□□□ -1.34
COL18A1P39060 AC103987.1-201ENST00000473394 348 ntBASIC6.65□□□□□ -1.34
COL18A1P39060 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.65□□□□□ -1.34
COL18A1P39060 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL18A1P39060 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.65□□□□□ -1.34
COL18A1P39060 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.65□□□□□ -1.34
COL18A1P39060 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.65□□□□□ -1.34
COL18A1P39060 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.65□□□□□ -1.34
COL18A1P39060 AL121873.1-201ENST00000616013 524 ntBASIC6.65□□□□□ -1.34
COL18A1P39060 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL18A1P39060 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.65□□□□□ -1.34
COL18A1P39060 AL137100.1-201ENST00000556703 1620 ntBASIC6.65□□□□□ -1.34
COL18A1P39060 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL18A1P39060 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.65□□□□□ -1.35
COL18A1P39060 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL18A1P39060 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC6.65□□□□□ -1.35
COL18A1P39060 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL18A1P39060 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL18A1P39060 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL18A1P39060 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL18A1P39060 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL18A1P39060 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
COL18A1P39060 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.64□□□□□ -1.35
COL18A1P39060 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.64□□□□□ -1.35
COL18A1P39060 RN7SL244P-201ENST00000493405 297 ntBASIC6.64□□□□□ -1.35
COL18A1P39060 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.64□□□□□ -1.35
COL18A1P39060 GTF2IP11-201ENST00000526931 420 ntBASIC6.64□□□□□ -1.35
COL18A1P39060 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.64□□□□□ -1.35
COL18A1P39060 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms