RNA–Protein interactions for RNA: ENST00000505712.5

LINC01339-201, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 2 BASIC

Gene LINC01339, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-201ENST00000505712 AEBP2Q6ZN18 517 aaPredicted RBP26.77■■□□□ 1.88
LINC01339-201ENST00000505712 CHIC1Q5VXU3 224 aa25.66■■□□□ 1.7
LINC01339-201ENST00000505712 SENP3Q9H4L4 574 aaPredicted RBP22.89■■□□□ 1.25
LINC01339-201ENST00000505712 PHF23Q9BUL5 403 aaPredicted RBP22.57■■□□□ 1.2
LINC01339-201ENST00000505712 FOXD1Q16676 465 aa21.25■□□□□ 0.99
LINC01339-201ENST00000505712 PLPPR3Q6T4P5 718 aa20.63■□□□□ 0.89
LINC01339-201ENST00000505712 PPP6R1Q9UPN7 881 aa19.98■□□□□ 0.79
LINC01339-201ENST00000505712 ADRA2BP18089 450 aa19.95■□□□□ 0.78
LINC01339-201ENST00000505712 PIAS4Q8N2W9 510 aaPredicted RBP19.95■□□□□ 0.78
LINC01339-201ENST00000505712 MSH5O43196 834 aa19.89■□□□□ 0.77
LINC01339-201ENST00000505712 POTEDQ86YR6 584 aa19■□□□□ 0.63
LINC01339-201ENST00000505712 SCAF1Q9H7N4 1312 aaKnown RBP18.36■□□□□ 0.53
LINC01339-201ENST00000505712 MAPK8IP2Q13387 824 aaPredicted RBP18.24■□□□□ 0.51
LINC01339-201ENST00000505712 DMRT2Q9Y5R5 561 aa18.16■□□□□ 0.5
LINC01339-201ENST00000505712 PPP4R3CPQ6ZMV5 832 aa18.07■□□□□ 0.48
LINC01339-201ENST00000505712 CNKSR2Q8WXI2 1034 aa17.72■□□□□ 0.43
LINC01339-201ENST00000505712 HOXD11P31277 338 aaPredicted RBP17.57■□□□□ 0.4
LINC01339-201ENST00000505712 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
LINC01339-201ENST00000505712 RNF216Q9NWF9 866 aaPredicted RBP17.51■□□□□ 0.39
LINC01339-201ENST00000505712 DCAF8L1A6NGE4 600 aa17.41■□□□□ 0.38
LINC01339-201ENST00000505712 NPM3O75607 178 aaKnown RBP17.18■□□□□ 0.34
LINC01339-201ENST00000505712 KCNA4P22459 653 aa17.02■□□□□ 0.32
LINC01339-201ENST00000505712 DNAJC5BQ9UF47 199 aa16.97■□□□□ 0.31
LINC01339-201ENST00000505712 RNF39Q9H2S5 420 aa16.95■□□□□ 0.3
LINC01339-201ENST00000505712 CACNB1Q02641 598 aaPredicted RBP16.92■□□□□ 0.3
LINC01339-201ENST00000505712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.76■□□□□ 0.27
LINC01339-201ENST00000505712 C1QBPQ07021 282 aaKnown RBP16.74■□□□□ 0.27
LINC01339-201ENST00000505712 U3KPZ7 1027 aaPredicted RBP16.39■□□□□ 0.21
LINC01339-201ENST00000505712 SLC4A2P04920 1241 aa16.34■□□□□ 0.21
LINC01339-201ENST00000505712 SLC4A1APQ9BWU0 796 aaKnown RBP16.15■□□□□ 0.18
LINC01339-201ENST00000505712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.09■□□□□ 0.17
LINC01339-201ENST00000505712 CAPN15O75808 1086 aa16.09■□□□□ 0.17
LINC01339-201ENST00000505712 HNRNPUL2Q1KMD3 747 aaKnown RBP16.09■□□□□ 0.17
LINC01339-201ENST00000505712 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
LINC01339-201ENST00000505712 APLP2Q06481 763 aa16.07■□□□□ 0.16
LINC01339-201ENST00000505712 SAMD1Q6SPF0 538 aaPredicted RBP15.99■□□□□ 0.15
LINC01339-201ENST00000505712 MYCNP04198 464 aaPredicted RBP15.93■□□□□ 0.14
LINC01339-201ENST00000505712 DSG3P32926 999 aa15.92■□□□□ 0.14
LINC01339-201ENST00000505712 ZNF219Q9P2Y4 722 aaPredicted RBP15.9■□□□□ 0.14
LINC01339-201ENST00000505712 TRHP20396 242 aaPredicted RBP15.87■□□□□ 0.13
LINC01339-201ENST00000505712 FOXD4L1Q9NU39 408 aa15.87■□□□□ 0.13
LINC01339-201ENST00000505712 ABCB7O75027 752 aa15.7■□□□□ 0.1
LINC01339-201ENST00000505712 ZBTB22O15209 634 aa15.63■□□□□ 0.09
LINC01339-201ENST00000505712 POLA2Q14181 598 aa15.48■□□□□ 0.07
LINC01339-201ENST00000505712 ATF5Q9Y2D1 282 aaPredicted RBP15.46■□□□□ 0.07
LINC01339-201ENST00000505712 ATXN8OSP0DMR3 200 aa15.38■□□□□ 0.05
LINC01339-201ENST00000505712 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
LINC01339-201ENST00000505712 RBM42Q9BTD8 480 aaKnown RBP15.26■□□□□ 0.03
LINC01339-201ENST00000505712 CSRNP3Q8WYN3 585 aa15.09■□□□□ 0.01
LINC01339-201ENST00000505712 EHMT2Q96KQ7 1210 aa15.04■□□□□ -0
LINC01339-201ENST00000505712 OSCARQ8IYS5 282 aa14.98□□□□□ -0.01
LINC01339-201ENST00000505712 FBLN2P98095 1184 aa14.95□□□□□ -0.02
LINC01339-201ENST00000505712 POTEHQ6S545 545 aa14.95□□□□□ -0.02
LINC01339-201ENST00000505712 AKT1S1Q96B36 256 aa14.93□□□□□ -0.02
LINC01339-201ENST00000505712 CHRDL2Q6WN34 429 aa14.81□□□□□ -0.04
LINC01339-201ENST00000505712 MKRN4PQ13434 485 aaPredicted RBP14.78□□□□□ -0.04
LINC01339-201ENST00000505712 SPDYE2BA6NHP3 402 aa14.77□□□□□ -0.05
LINC01339-201ENST00000505712 SPDYE6P0CI01 402 aa14.77□□□□□ -0.05
LINC01339-201ENST00000505712 SPDYE2Q495Y8 402 aa14.77□□□□□ -0.05
LINC01339-201ENST00000505712 REM2Q8IYK8 340 aaPredicted RBP14.75□□□□□ -0.05
LINC01339-201ENST00000505712 ZNF692Q9BU19 519 aaPredicted RBP14.61□□□□□ -0.07
LINC01339-201ENST00000505712 PITPNM1O00562 1244 aa14.59□□□□□ -0.07
LINC01339-201ENST00000505712 SSUH2Q9Y2M2 353 aa14.57□□□□□ -0.08
LINC01339-201ENST00000505712 PIP4P2Q8N4L2 257 aa14.47□□□□□ -0.09
LINC01339-201ENST00000505712 SPDYE1Q8NFV5 336 aaPredicted RBP14.47□□□□□ -0.09
LINC01339-201ENST00000505712 FXR2P51116 673 aaKnown RBP eCLIP14.42□□□□□ -0.1
LINC01339-201ENST00000505712 CLEC11AQ9Y240 323 aa14.41□□□□□ -0.1
LINC01339-201ENST00000505712 PABPN1Q86U42 306 aaKnown RBP eCLIP14.39□□□□□ -0.11
LINC01339-201ENST00000505712 SPDYE4A6NLX3 237 aa14.23□□□□□ -0.13
LINC01339-201ENST00000505712 PRKAR2AP13861 404 aaKnown RBP14.22□□□□□ -0.13
LINC01339-201ENST00000505712 PRR29P0C7W0 189 aa14.21□□□□□ -0.13
LINC01339-201ENST00000505712 HAX1O00165 279 aa14.18□□□□□ -0.14
LINC01339-201ENST00000505712 SP7Q8TDD2 431 aaPredicted RBP14.12□□□□□ -0.15
LINC01339-201ENST00000505712 STAG3Q9UJ98 1225 aa14.09□□□□□ -0.15
LINC01339-201ENST00000505712 CHADLQ6NUI6 762 aa14.07□□□□□ -0.16
LINC01339-201ENST00000505712 C19orf67A6NJJ6 358 aa13.96□□□□□ -0.17
LINC01339-201ENST00000505712 EVX2Q03828 476 aa13.94□□□□□ -0.18
LINC01339-201ENST00000505712 FARP1Q9Y4F1 1045 aaPredicted RBP13.93□□□□□ -0.18
LINC01339-201ENST00000505712 PROM2Q8N271 834 aa13.91□□□□□ -0.18
LINC01339-201ENST00000505712 CREBZFQ9NS37 354 aa13.87□□□□□ -0.19
LINC01339-201ENST00000505712 CD44P16070 742 aaKnown RBP13.8□□□□□ -0.2
LINC01339-201ENST00000505712 FKBP8Q14318 412 aa13.71□□□□□ -0.21
LINC01339-201ENST00000505712 GABBR2O75899 941 aa13.69□□□□□ -0.22
LINC01339-201ENST00000505712 NPM1P06748 294 aaKnown RBP eCLIP13.69□□□□□ -0.22
LINC01339-201ENST00000505712 MNX1P50219 401 aaPredicted RBP13.65□□□□□ -0.22
LINC01339-201ENST00000505712 CLCN6P51797 869 aa13.64□□□□□ -0.23
LINC01339-201ENST00000505712 ZRANB1Q9UGI0 708 aa13.63□□□□□ -0.23
LINC01339-201ENST00000505712 PAK3O75914 559 aaPredicted RBP13.62□□□□□ -0.23
LINC01339-201ENST00000505712 PLEKHG5O94827 1062 aa13.6□□□□□ -0.23
LINC01339-201ENST00000505712 ZNF579Q8NAF0 562 aaKnown RBP13.6□□□□□ -0.23
LINC01339-201ENST00000505712 MIER1Q8N108 512 aa13.56□□□□□ -0.24
LINC01339-201ENST00000505712 PLCD3Q8N3E9 789 aa13.5□□□□□ -0.25
LINC01339-201ENST00000505712 FBXO3Q9UK99 471 aa13.44□□□□□ -0.26
LINC01339-201ENST00000505712 PHF12Q96QT6 1004 aa13.43□□□□□ -0.26
LINC01339-201ENST00000505712 ZBTB47Q9UFB7 747 aaPredicted RBP13.43□□□□□ -0.26
LINC01339-201ENST00000505712 DCBLD2Q96PD2 775 aa13.41□□□□□ -0.26
LINC01339-201ENST00000505712 TSPYL2Q9H2G4 693 aaPredicted RBP13.39□□□□□ -0.27
LINC01339-201ENST00000505712 GALR2O43603 387 aaPredicted RBP13.38□□□□□ -0.27
LINC01339-201ENST00000505712 POTEIP0CG38 1075 aa13.37□□□□□ -0.27
LINC01339-201ENST00000505712 RASEFQ8IZ41 740 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms