RNA–Protein interactions for RNA: ENST00000438416.2

AP000943.1-201, humanhuman

TSL 3 BASIC

Gene AP000943.1, Length 712 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000943.1-201ENST00000438416 AEBP2Q6ZN18 517 aaPredicted RBP16.35■□□□□ 0.21
AP000943.1-201ENST00000438416 CHIC1Q5VXU3 224 aa16■□□□□ 0.15
AP000943.1-201ENST00000438416 PHF23Q9BUL5 403 aaPredicted RBP14.07□□□□□ -0.16
AP000943.1-201ENST00000438416 SENP3Q9H4L4 574 aaPredicted RBP13.86□□□□□ -0.19
AP000943.1-201ENST00000438416 PLPPR3Q6T4P5 718 aa12.97□□□□□ -0.33
AP000943.1-201ENST00000438416 FOXD1Q16676 465 aa12.85□□□□□ -0.35
AP000943.1-201ENST00000438416 PPP6R1Q9UPN7 881 aa12.37□□□□□ -0.43
AP000943.1-201ENST00000438416 ADRA2BP18089 450 aa12.31□□□□□ -0.44
AP000943.1-201ENST00000438416 PIAS4Q8N2W9 510 aaPredicted RBP12.07□□□□□ -0.48
AP000943.1-201ENST00000438416 MSH5O43196 834 aa11.85□□□□□ -0.51
AP000943.1-201ENST00000438416 NISCHQ9Y2I1 1504 aa11.62□□□□□ -0.55
AP000943.1-201ENST00000438416 PPP4R3CPQ6ZMV5 832 aa11.4□□□□□ -0.58
AP000943.1-201ENST00000438416 SCAF1Q9H7N4 1312 aaKnown RBP11.27□□□□□ -0.61
AP000943.1-201ENST00000438416 KCNA4P22459 653 aa11.17□□□□□ -0.62
AP000943.1-201ENST00000438416 MAPK8IP2Q13387 824 aaPredicted RBP11.15□□□□□ -0.62
AP000943.1-201ENST00000438416 CNKSR2Q8WXI2 1034 aa11.11□□□□□ -0.63
AP000943.1-201ENST00000438416 DMRT2Q9Y5R5 561 aa11.1□□□□□ -0.63
AP000943.1-201ENST00000438416 NCBP3Q53F19 620 aaKnown RBP11.09□□□□□ -0.63
AP000943.1-201ENST00000438416 NPM3O75607 178 aaKnown RBP10.98□□□□□ -0.65
AP000943.1-201ENST00000438416 POTEDQ86YR6 584 aa10.96□□□□□ -0.65
AP000943.1-201ENST00000438416 RNF216Q9NWF9 866 aaPredicted RBP10.91□□□□□ -0.66
AP000943.1-201ENST00000438416 HOXD11P31277 338 aaPredicted RBP10.9□□□□□ -0.66
AP000943.1-201ENST00000438416 DNAJC5BQ9UF47 199 aa10.87□□□□□ -0.67
AP000943.1-201ENST00000438416 SLC4A1APQ9BWU0 796 aaKnown RBP10.6□□□□□ -0.71
AP000943.1-201ENST00000438416 CCDC180Q9P1Z9 1646 aa10.46□□□□□ -0.74
AP000943.1-201ENST00000438416 ABCC9O60706 1549 aa10.44□□□□□ -0.74
AP000943.1-201ENST00000438416 DCAF8L1A6NGE4 600 aa10.39□□□□□ -0.75
AP000943.1-201ENST00000438416 SLC4A2P04920 1241 aa10.39□□□□□ -0.75
AP000943.1-201ENST00000438416 ZBTB22O15209 634 aa10.32□□□□□ -0.76
AP000943.1-201ENST00000438416 FOXD4L1Q9NU39 408 aa10.29□□□□□ -0.76
AP000943.1-201ENST00000438416 CSRNP3Q8WYN3 585 aa10.25□□□□□ -0.77
AP000943.1-201ENST00000438416 EHMT2Q96KQ7 1210 aa10.24□□□□□ -0.77
AP000943.1-201ENST00000438416 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.22□□□□□ -0.77
AP000943.1-201ENST00000438416 RNF39Q9H2S5 420 aa10.18□□□□□ -0.78
AP000943.1-201ENST00000438416 U3KPZ7 1027 aaPredicted RBP10.17□□□□□ -0.78
AP000943.1-201ENST00000438416 MYCNP04198 464 aaPredicted RBP10.14□□□□□ -0.79
AP000943.1-201ENST00000438416 C1QBPQ07021 282 aaKnown RBP10.05□□□□□ -0.8
AP000943.1-201ENST00000438416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.02□□□□□ -0.81
AP000943.1-201ENST00000438416 HNRNPUL2Q1KMD3 747 aaKnown RBP10.02□□□□□ -0.81
AP000943.1-201ENST00000438416 ATXN8OSP0DMR3 200 aa9.99□□□□□ -0.81
AP000943.1-201ENST00000438416 SAMD1Q6SPF0 538 aaPredicted RBP9.99□□□□□ -0.81
AP000943.1-201ENST00000438416 RB1CC1Q8TDY2 1594 aa9.92□□□□□ -0.82
AP000943.1-201ENST00000438416 APLP2Q06481 763 aa9.89□□□□□ -0.83
AP000943.1-201ENST00000438416 NACADO15069 1562 aa9.86□□□□□ -0.83
AP000943.1-201ENST00000438416 ATF5Q9Y2D1 282 aaPredicted RBP9.85□□□□□ -0.83
AP000943.1-201ENST00000438416 SPINK5Q9NQ38 1064 aaPredicted RBP9.83□□□□□ -0.84
AP000943.1-201ENST00000438416 UNC13AQ9UPW8 1703 aa9.82□□□□□ -0.84
AP000943.1-201ENST00000438416 ZNF219Q9P2Y4 722 aaPredicted RBP9.78□□□□□ -0.84
AP000943.1-201ENST00000438416 CACNB1Q02641 598 aaPredicted RBP9.77□□□□□ -0.85
AP000943.1-201ENST00000438416 MYO15BQ96JP2 1530 aa9.75□□□□□ -0.85
AP000943.1-201ENST00000438416 BICRAQ9NZM4 1560 aa9.75□□□□□ -0.85
AP000943.1-201ENST00000438416 CAPN15O75808 1086 aa9.72□□□□□ -0.85
AP000943.1-201ENST00000438416 PABPN1Q86U42 306 aaKnown RBP eCLIP9.68□□□□□ -0.86
AP000943.1-201ENST00000438416 DSG3P32926 999 aa9.67□□□□□ -0.86
AP000943.1-201ENST00000438416 TRHP20396 242 aaPredicted RBP9.66□□□□□ -0.86
AP000943.1-201ENST00000438416 DCAF8L2P0C7V8 631 aa9.65□□□□□ -0.86
AP000943.1-201ENST00000438416 ZCCHC6Q5VYS8 1495 aaKnown RBP9.63□□□□□ -0.87
AP000943.1-201ENST00000438416 DCAF1Q9Y4B6 1507 aa9.61□□□□□ -0.87
AP000943.1-201ENST00000438416 POLA2Q14181 598 aa9.57□□□□□ -0.88
AP000943.1-201ENST00000438416 ABCB7O75027 752 aa9.54□□□□□ -0.88
AP000943.1-201ENST00000438416 SHROOM4Q9ULL8 1493 aa9.52□□□□□ -0.89
AP000943.1-201ENST00000438416 SCRIBQ14160 1630 aa9.49□□□□□ -0.89
AP000943.1-201ENST00000438416 ZBTB12Q9Y330 459 aaPredicted RBP9.48□□□□□ -0.89
AP000943.1-201ENST00000438416 CC2D2AQ9P2K1 1620 aa9.48□□□□□ -0.89
AP000943.1-201ENST00000438416 MKRN4PQ13434 485 aaPredicted RBP9.46□□□□□ -0.9
AP000943.1-201ENST00000438416 EIF4G1Q04637 1599 aaKnown RBP9.44□□□□□ -0.9
AP000943.1-201ENST00000438416 CECR2Q9BXF3 1484 aa9.4□□□□□ -0.9
AP000943.1-201ENST00000438416 FBLN2P98095 1184 aa9.38□□□□□ -0.91
AP000943.1-201ENST00000438416 OSCARQ8IYS5 282 aa9.27□□□□□ -0.93
AP000943.1-201ENST00000438416 SPDYE2BA6NHP3 402 aa9.24□□□□□ -0.93
AP000943.1-201ENST00000438416 SPDYE6P0CI01 402 aa9.24□□□□□ -0.93
AP000943.1-201ENST00000438416 SPDYE2Q495Y8 402 aa9.24□□□□□ -0.93
AP000943.1-201ENST00000438416 PROM2Q8N271 834 aa9.22□□□□□ -0.93
AP000943.1-201ENST00000438416 SSUH2Q9Y2M2 353 aa9.22□□□□□ -0.93
AP000943.1-201ENST00000438416 RBM42Q9BTD8 480 aaKnown RBP9.2□□□□□ -0.94
AP000943.1-201ENST00000438416 SPDYE4A6NLX3 237 aa9.18□□□□□ -0.94
AP000943.1-201ENST00000438416 FKBP8Q14318 412 aa9.18□□□□□ -0.94
AP000943.1-201ENST00000438416 NCAPD3P42695 1498 aa9.12□□□□□ -0.95
AP000943.1-201ENST00000438416 AKT1S1Q96B36 256 aa9.11□□□□□ -0.95
AP000943.1-201ENST00000438416 ZNF692Q9BU19 519 aaPredicted RBP9.11□□□□□ -0.95
AP000943.1-201ENST00000438416 SMARCA4P51532 1647 aa9.09□□□□□ -0.95
AP000943.1-201ENST00000438416 ATAD2BQ9ULI0 1458 aa9.08□□□□□ -0.96
AP000943.1-201ENST00000438416 DNAJC5Q9H3Z4 198 aa9.06□□□□□ -0.96
AP000943.1-201ENST00000438416 HMGXB3Q12766 1538 aa9.05□□□□□ -0.96
AP000943.1-201ENST00000438416 SMARCA2P51531 1590 aa9.03□□□□□ -0.96
AP000943.1-201ENST00000438416 PEG3Q9GZU2 1588 aa9.02□□□□□ -0.97
AP000943.1-201ENST00000438416 CUX2O14529 1486 aa9.02□□□□□ -0.97
AP000943.1-201ENST00000438416 NESP48681 1621 aa9.01□□□□□ -0.97
AP000943.1-201ENST00000438416 BAZ1AQ9NRL2 1556 aaPredicted RBP8.99□□□□□ -0.97
AP000943.1-201ENST00000438416 REM2Q8IYK8 340 aaPredicted RBP8.98□□□□□ -0.97
AP000943.1-201ENST00000438416 MROH2BQ7Z745 1585 aa8.97□□□□□ -0.97
AP000943.1-201ENST00000438416 ERCC6Q03468 1493 aa8.96□□□□□ -0.98
AP000943.1-201ENST00000438416 THOC2Q8NI27 1593 aaKnown RBP8.95□□□□□ -0.98
AP000943.1-201ENST00000438416 BAZ1BQ9UIG0 1483 aaKnown RBP8.95□□□□□ -0.98
AP000943.1-201ENST00000438416 SPDYE1Q8NFV5 336 aaPredicted RBP8.93□□□□□ -0.98
AP000943.1-201ENST00000438416 KIF21AQ7Z4S6 1674 aa8.91□□□□□ -0.98
AP000943.1-201ENST00000438416 LAMC3Q9Y6N6 1575 aa8.9□□□□□ -0.98
AP000943.1-201ENST00000438416 STAG3Q9UJ98 1225 aa8.9□□□□□ -0.98
AP000943.1-201ENST00000438416 PITPNM1O00562 1244 aa8.89□□□□□ -0.99
AP000943.1-201ENST00000438416 FBXO3Q9UK99 471 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms