RNA–Protein interactions for RNA: ENST00000438416.2

AP000943.1-201, humanhuman

TSL 3 BASIC

Gene AP000943.1, Length 712 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000943.1-201ENST00000438416 AEBP2Q6ZN18 517 aaPredicted RBP16.35■□□□□ 0.21
AP000943.1-201ENST00000438416 CHIC1Q5VXU3 224 aa16■□□□□ 0.15
AP000943.1-201ENST00000438416 PHF23Q9BUL5 403 aaPredicted RBP14.07□□□□□ -0.16
AP000943.1-201ENST00000438416 SENP3Q9H4L4 574 aaPredicted RBP13.86□□□□□ -0.19
AP000943.1-201ENST00000438416 PLPPR3Q6T4P5 718 aa12.97□□□□□ -0.33
AP000943.1-201ENST00000438416 FOXD1Q16676 465 aa12.85□□□□□ -0.35
AP000943.1-201ENST00000438416 PPP6R1Q9UPN7 881 aa12.37□□□□□ -0.43
AP000943.1-201ENST00000438416 ADRA2BP18089 450 aa12.31□□□□□ -0.44
AP000943.1-201ENST00000438416 PIAS4Q8N2W9 510 aaPredicted RBP12.07□□□□□ -0.48
AP000943.1-201ENST00000438416 MSH5O43196 834 aa11.85□□□□□ -0.51
AP000943.1-201ENST00000438416 NISCHQ9Y2I1 1504 aa11.62□□□□□ -0.55
AP000943.1-201ENST00000438416 PPP4R3CPQ6ZMV5 832 aa11.4□□□□□ -0.58
AP000943.1-201ENST00000438416 SCAF1Q9H7N4 1312 aaKnown RBP11.27□□□□□ -0.61
AP000943.1-201ENST00000438416 KCNA4P22459 653 aa11.17□□□□□ -0.62
AP000943.1-201ENST00000438416 MAPK8IP2Q13387 824 aaPredicted RBP11.15□□□□□ -0.62
AP000943.1-201ENST00000438416 CNKSR2Q8WXI2 1034 aa11.11□□□□□ -0.63
AP000943.1-201ENST00000438416 DMRT2Q9Y5R5 561 aa11.1□□□□□ -0.63
AP000943.1-201ENST00000438416 NCBP3Q53F19 620 aaKnown RBP11.09□□□□□ -0.63
AP000943.1-201ENST00000438416 NPM3O75607 178 aaKnown RBP10.98□□□□□ -0.65
AP000943.1-201ENST00000438416 POTEDQ86YR6 584 aa10.96□□□□□ -0.65
AP000943.1-201ENST00000438416 RNF216Q9NWF9 866 aaPredicted RBP10.91□□□□□ -0.66
AP000943.1-201ENST00000438416 HOXD11P31277 338 aaPredicted RBP10.9□□□□□ -0.66
AP000943.1-201ENST00000438416 DNAJC5BQ9UF47 199 aa10.87□□□□□ -0.67
AP000943.1-201ENST00000438416 SLC4A1APQ9BWU0 796 aaKnown RBP10.6□□□□□ -0.71
AP000943.1-201ENST00000438416 CCDC180Q9P1Z9 1646 aa10.46□□□□□ -0.74
AP000943.1-201ENST00000438416 ABCC9O60706 1549 aa10.44□□□□□ -0.74
AP000943.1-201ENST00000438416 DCAF8L1A6NGE4 600 aa10.39□□□□□ -0.75
AP000943.1-201ENST00000438416 SLC4A2P04920 1241 aa10.39□□□□□ -0.75
AP000943.1-201ENST00000438416 ZBTB22O15209 634 aa10.32□□□□□ -0.76
AP000943.1-201ENST00000438416 FOXD4L1Q9NU39 408 aa10.29□□□□□ -0.76
AP000943.1-201ENST00000438416 CSRNP3Q8WYN3 585 aa10.25□□□□□ -0.77
AP000943.1-201ENST00000438416 EHMT2Q96KQ7 1210 aa10.24□□□□□ -0.77
AP000943.1-201ENST00000438416 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.22□□□□□ -0.77
AP000943.1-201ENST00000438416 RNF39Q9H2S5 420 aa10.18□□□□□ -0.78
AP000943.1-201ENST00000438416 U3KPZ7 1027 aaPredicted RBP10.17□□□□□ -0.78
AP000943.1-201ENST00000438416 MYCNP04198 464 aaPredicted RBP10.14□□□□□ -0.79
AP000943.1-201ENST00000438416 C1QBPQ07021 282 aaKnown RBP10.05□□□□□ -0.8
AP000943.1-201ENST00000438416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.02□□□□□ -0.81
AP000943.1-201ENST00000438416 HNRNPUL2Q1KMD3 747 aaKnown RBP10.02□□□□□ -0.81
AP000943.1-201ENST00000438416 ATXN8OSP0DMR3 200 aa9.99□□□□□ -0.81
AP000943.1-201ENST00000438416 SAMD1Q6SPF0 538 aaPredicted RBP9.99□□□□□ -0.81
AP000943.1-201ENST00000438416 RB1CC1Q8TDY2 1594 aa9.92□□□□□ -0.82
AP000943.1-201ENST00000438416 APLP2Q06481 763 aa9.89□□□□□ -0.83
AP000943.1-201ENST00000438416 NACADO15069 1562 aa9.86□□□□□ -0.83
AP000943.1-201ENST00000438416 ATF5Q9Y2D1 282 aaPredicted RBP9.85□□□□□ -0.83
AP000943.1-201ENST00000438416 SPINK5Q9NQ38 1064 aaPredicted RBP9.83□□□□□ -0.84
AP000943.1-201ENST00000438416 UNC13AQ9UPW8 1703 aa9.82□□□□□ -0.84
AP000943.1-201ENST00000438416 ZNF219Q9P2Y4 722 aaPredicted RBP9.78□□□□□ -0.84
AP000943.1-201ENST00000438416 CACNB1Q02641 598 aaPredicted RBP9.77□□□□□ -0.85
AP000943.1-201ENST00000438416 MYO15BQ96JP2 1530 aa9.75□□□□□ -0.85
AP000943.1-201ENST00000438416 BICRAQ9NZM4 1560 aa9.75□□□□□ -0.85
AP000943.1-201ENST00000438416 CAPN15O75808 1086 aa9.72□□□□□ -0.85
AP000943.1-201ENST00000438416 PABPN1Q86U42 306 aaKnown RBP eCLIP9.68□□□□□ -0.86
AP000943.1-201ENST00000438416 DSG3P32926 999 aa9.67□□□□□ -0.86
AP000943.1-201ENST00000438416 TRHP20396 242 aaPredicted RBP9.66□□□□□ -0.86
AP000943.1-201ENST00000438416 DCAF8L2P0C7V8 631 aa9.65□□□□□ -0.86
AP000943.1-201ENST00000438416 ZCCHC6Q5VYS8 1495 aaKnown RBP9.63□□□□□ -0.87
AP000943.1-201ENST00000438416 DCAF1Q9Y4B6 1507 aa9.61□□□□□ -0.87
AP000943.1-201ENST00000438416 POLA2Q14181 598 aa9.57□□□□□ -0.88
AP000943.1-201ENST00000438416 ABCB7O75027 752 aa9.54□□□□□ -0.88
AP000943.1-201ENST00000438416 SHROOM4Q9ULL8 1493 aa9.52□□□□□ -0.89
AP000943.1-201ENST00000438416 SCRIBQ14160 1630 aa9.49□□□□□ -0.89
AP000943.1-201ENST00000438416 ZBTB12Q9Y330 459 aaPredicted RBP9.48□□□□□ -0.89
AP000943.1-201ENST00000438416 CC2D2AQ9P2K1 1620 aa9.48□□□□□ -0.89
AP000943.1-201ENST00000438416 MKRN4PQ13434 485 aaPredicted RBP9.46□□□□□ -0.9
AP000943.1-201ENST00000438416 EIF4G1Q04637 1599 aaKnown RBP9.44□□□□□ -0.9
AP000943.1-201ENST00000438416 CECR2Q9BXF3 1484 aa9.4□□□□□ -0.9
AP000943.1-201ENST00000438416 FBLN2P98095 1184 aa9.38□□□□□ -0.91
AP000943.1-201ENST00000438416 OSCARQ8IYS5 282 aa9.27□□□□□ -0.93
AP000943.1-201ENST00000438416 SPDYE2BA6NHP3 402 aa9.24□□□□□ -0.93
AP000943.1-201ENST00000438416 SPDYE6P0CI01 402 aa9.24□□□□□ -0.93
AP000943.1-201ENST00000438416 SPDYE2Q495Y8 402 aa9.24□□□□□ -0.93
AP000943.1-201ENST00000438416 PROM2Q8N271 834 aa9.22□□□□□ -0.93
AP000943.1-201ENST00000438416 SSUH2Q9Y2M2 353 aa9.22□□□□□ -0.93
AP000943.1-201ENST00000438416 RBM42Q9BTD8 480 aaKnown RBP9.2□□□□□ -0.94
AP000943.1-201ENST00000438416 SPDYE4A6NLX3 237 aa9.18□□□□□ -0.94
AP000943.1-201ENST00000438416 FKBP8Q14318 412 aa9.18□□□□□ -0.94
AP000943.1-201ENST00000438416 NCAPD3P42695 1498 aa9.12□□□□□ -0.95
AP000943.1-201ENST00000438416 AKT1S1Q96B36 256 aa9.11□□□□□ -0.95
AP000943.1-201ENST00000438416 ZNF692Q9BU19 519 aaPredicted RBP9.11□□□□□ -0.95
AP000943.1-201ENST00000438416 SMARCA4P51532 1647 aa9.09□□□□□ -0.95
AP000943.1-201ENST00000438416 ATAD2BQ9ULI0 1458 aa9.08□□□□□ -0.96
AP000943.1-201ENST00000438416 DNAJC5Q9H3Z4 198 aa9.06□□□□□ -0.96
AP000943.1-201ENST00000438416 HMGXB3Q12766 1538 aa9.05□□□□□ -0.96
AP000943.1-201ENST00000438416 SMARCA2P51531 1590 aa9.03□□□□□ -0.96
AP000943.1-201ENST00000438416 PEG3Q9GZU2 1588 aa9.02□□□□□ -0.97
AP000943.1-201ENST00000438416 CUX2O14529 1486 aa9.02□□□□□ -0.97
AP000943.1-201ENST00000438416 NESP48681 1621 aa9.01□□□□□ -0.97
AP000943.1-201ENST00000438416 BAZ1AQ9NRL2 1556 aaPredicted RBP8.99□□□□□ -0.97
AP000943.1-201ENST00000438416 REM2Q8IYK8 340 aaPredicted RBP8.98□□□□□ -0.97
AP000943.1-201ENST00000438416 MROH2BQ7Z745 1585 aa8.97□□□□□ -0.97
AP000943.1-201ENST00000438416 ERCC6Q03468 1493 aa8.96□□□□□ -0.98
AP000943.1-201ENST00000438416 THOC2Q8NI27 1593 aaKnown RBP8.95□□□□□ -0.98
AP000943.1-201ENST00000438416 BAZ1BQ9UIG0 1483 aaKnown RBP8.95□□□□□ -0.98
AP000943.1-201ENST00000438416 SPDYE1Q8NFV5 336 aaPredicted RBP8.93□□□□□ -0.98
AP000943.1-201ENST00000438416 KIF21AQ7Z4S6 1674 aa8.91□□□□□ -0.98
AP000943.1-201ENST00000438416 LAMC3Q9Y6N6 1575 aa8.9□□□□□ -0.98
AP000943.1-201ENST00000438416 STAG3Q9UJ98 1225 aa8.9□□□□□ -0.98
AP000943.1-201ENST00000438416 PITPNM1O00562 1244 aa8.89□□□□□ -0.99
AP000943.1-201ENST00000438416 FBXO3Q9UK99 471 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms