RNA–Protein interactions for RNA: ENST00000410569.1

RNU4-25P-201, Transcript of RNA, U4 small nuclear 25, pseudogene, humanhuman

BASIC

Gene RNU4-25P, Length 230 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-25P-201ENST00000410569 AEBP2Q6ZN18 517 aaPredicted RBP18.24■□□□□ 0.51
RNU4-25P-201ENST00000410569 CHIC1Q5VXU3 224 aa17.54■□□□□ 0.4
RNU4-25P-201ENST00000410569 SENP3Q9H4L4 574 aaPredicted RBP15.52■□□□□ 0.08
RNU4-25P-201ENST00000410569 PHF23Q9BUL5 403 aaPredicted RBP15.39■□□□□ 0.05
RNU4-25P-201ENST00000410569 FOXD1Q16676 465 aa14.44□□□□□ -0.1
RNU4-25P-201ENST00000410569 PLPPR3Q6T4P5 718 aa14.1□□□□□ -0.15
RNU4-25P-201ENST00000410569 PPP6R1Q9UPN7 881 aa13.66□□□□□ -0.22
RNU4-25P-201ENST00000410569 ADRA2BP18089 450 aa13.62□□□□□ -0.23
RNU4-25P-201ENST00000410569 PIAS4Q8N2W9 510 aaPredicted RBP13.52□□□□□ -0.25
RNU4-25P-201ENST00000410569 MSH5O43196 834 aa13.42□□□□□ -0.26
RNU4-25P-201ENST00000410569 POTEDQ86YR6 584 aa12.72□□□□□ -0.37
RNU4-25P-201ENST00000410569 SCAF1Q9H7N4 1312 aaKnown RBP12.46□□□□□ -0.41
RNU4-25P-201ENST00000410569 MAPK8IP2Q13387 824 aaPredicted RBP12.44□□□□□ -0.42
RNU4-25P-201ENST00000410569 PPP4R3CPQ6ZMV5 832 aa12.39□□□□□ -0.43
RNU4-25P-201ENST00000410569 DMRT2Q9Y5R5 561 aa12.35□□□□□ -0.43
RNU4-25P-201ENST00000410569 CNKSR2Q8WXI2 1034 aa12.11□□□□□ -0.47
RNU4-25P-201ENST00000410569 HOXD11P31277 338 aaPredicted RBP11.99□□□□□ -0.49
RNU4-25P-201ENST00000410569 NCBP3Q53F19 620 aaKnown RBP11.97□□□□□ -0.49
RNU4-25P-201ENST00000410569 RNF216Q9NWF9 866 aaPredicted RBP11.95□□□□□ -0.5
RNU4-25P-201ENST00000410569 NPM3O75607 178 aaKnown RBP11.81□□□□□ -0.52
RNU4-25P-201ENST00000410569 KCNA4P22459 653 aa11.77□□□□□ -0.53
RNU4-25P-201ENST00000410569 DCAF8L1A6NGE4 600 aa11.76□□□□□ -0.53
RNU4-25P-201ENST00000410569 NISCHQ9Y2I1 1504 aa11.65□□□□□ -0.55
RNU4-25P-201ENST00000410569 DNAJC5BQ9UF47 199 aa11.57□□□□□ -0.56
RNU4-25P-201ENST00000410569 RNF39Q9H2S5 420 aa11.48□□□□□ -0.57
RNU4-25P-201ENST00000410569 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.38□□□□□ -0.59
RNU4-25P-201ENST00000410569 CACNB1Q02641 598 aaPredicted RBP11.35□□□□□ -0.59
RNU4-25P-201ENST00000410569 C1QBPQ07021 282 aaKnown RBP11.32□□□□□ -0.6
RNU4-25P-201ENST00000410569 SLC4A2P04920 1241 aa11.23□□□□□ -0.61
RNU4-25P-201ENST00000410569 U3KPZ7 1027 aaPredicted RBP11.2□□□□□ -0.62
RNU4-25P-201ENST00000410569 SLC4A1APQ9BWU0 796 aaKnown RBP11.15□□□□□ -0.62
RNU4-25P-201ENST00000410569 SPINK5Q9NQ38 1064 aaPredicted RBP10.95□□□□□ -0.66
RNU4-25P-201ENST00000410569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.94□□□□□ -0.66
RNU4-25P-201ENST00000410569 HNRNPUL2Q1KMD3 747 aaKnown RBP10.94□□□□□ -0.66
RNU4-25P-201ENST00000410569 MYCNP04198 464 aaPredicted RBP10.92□□□□□ -0.66
RNU4-25P-201ENST00000410569 FOXD4L1Q9NU39 408 aa10.92□□□□□ -0.66
RNU4-25P-201ENST00000410569 CAPN15O75808 1086 aa10.9□□□□□ -0.66
RNU4-25P-201ENST00000410569 APLP2Q06481 763 aa10.89□□□□□ -0.67
RNU4-25P-201ENST00000410569 SAMD1Q6SPF0 538 aaPredicted RBP10.89□□□□□ -0.67
RNU4-25P-201ENST00000410569 ZBTB22O15209 634 aa10.84□□□□□ -0.67
RNU4-25P-201ENST00000410569 DSG3P32926 999 aa10.82□□□□□ -0.68
RNU4-25P-201ENST00000410569 ZNF219Q9P2Y4 722 aaPredicted RBP10.79□□□□□ -0.68
RNU4-25P-201ENST00000410569 TRHP20396 242 aaPredicted RBP10.78□□□□□ -0.68
RNU4-25P-201ENST00000410569 ABCC9O60706 1549 aa10.71□□□□□ -0.69
RNU4-25P-201ENST00000410569 ABCB7O75027 752 aa10.67□□□□□ -0.7
RNU4-25P-201ENST00000410569 ATF5Q9Y2D1 282 aaPredicted RBP10.64□□□□□ -0.71
RNU4-25P-201ENST00000410569 CCDC180Q9P1Z9 1646 aa10.61□□□□□ -0.71
RNU4-25P-201ENST00000410569 ATXN8OSP0DMR3 200 aa10.59□□□□□ -0.71
RNU4-25P-201ENST00000410569 POLA2Q14181 598 aa10.55□□□□□ -0.72
RNU4-25P-201ENST00000410569 CSRNP3Q8WYN3 585 aa10.54□□□□□ -0.72
RNU4-25P-201ENST00000410569 EHMT2Q96KQ7 1210 aa10.47□□□□□ -0.73
RNU4-25P-201ENST00000410569 ZBTB12Q9Y330 459 aaPredicted RBP10.37□□□□□ -0.75
RNU4-25P-201ENST00000410569 RBM42Q9BTD8 480 aaKnown RBP10.31□□□□□ -0.76
RNU4-25P-201ENST00000410569 OSCARQ8IYS5 282 aa10.21□□□□□ -0.77
RNU4-25P-201ENST00000410569 FBLN2P98095 1184 aa10.2□□□□□ -0.78
RNU4-25P-201ENST00000410569 MKRN4PQ13434 485 aaPredicted RBP10.18□□□□□ -0.78
RNU4-25P-201ENST00000410569 AKT1S1Q96B36 256 aa10.13□□□□□ -0.79
RNU4-25P-201ENST00000410569 RB1CC1Q8TDY2 1594 aa10.13□□□□□ -0.79
RNU4-25P-201ENST00000410569 SPDYE2BA6NHP3 402 aa10.08□□□□□ -0.8
RNU4-25P-201ENST00000410569 SPDYE6P0CI01 402 aa10.08□□□□□ -0.8
RNU4-25P-201ENST00000410569 SPDYE2Q495Y8 402 aa10.08□□□□□ -0.8
RNU4-25P-201ENST00000410569 REM2Q8IYK8 340 aaPredicted RBP10.03□□□□□ -0.8
RNU4-25P-201ENST00000410569 UNC13AQ9UPW8 1703 aa10.02□□□□□ -0.81
RNU4-25P-201ENST00000410569 NACADO15069 1562 aa10.01□□□□□ -0.81
RNU4-25P-201ENST00000410569 POTEHQ6S545 545 aa10□□□□□ -0.81
RNU4-25P-201ENST00000410569 CHRDL2Q6WN34 429 aa9.99□□□□□ -0.81
RNU4-25P-201ENST00000410569 SSUH2Q9Y2M2 353 aa9.98□□□□□ -0.81
RNU4-25P-201ENST00000410569 ZNF692Q9BU19 519 aaPredicted RBP9.97□□□□□ -0.81
RNU4-25P-201ENST00000410569 PITPNM1O00562 1244 aa9.92□□□□□ -0.82
RNU4-25P-201ENST00000410569 BICRAQ9NZM4 1560 aa9.89□□□□□ -0.83
RNU4-25P-201ENST00000410569 PABPN1Q86U42 306 aaKnown RBP eCLIP9.87□□□□□ -0.83
RNU4-25P-201ENST00000410569 SPDYE1Q8NFV5 336 aaPredicted RBP9.83□□□□□ -0.84
RNU4-25P-201ENST00000410569 PIP4P2Q8N4L2 257 aa9.81□□□□□ -0.84
RNU4-25P-201ENST00000410569 FXR2P51116 673 aaKnown RBP eCLIP9.8□□□□□ -0.84
RNU4-25P-201ENST00000410569 MYO15BQ96JP2 1530 aa9.8□□□□□ -0.84
RNU4-25P-201ENST00000410569 SPDYE4A6NLX3 237 aa9.79□□□□□ -0.84
RNU4-25P-201ENST00000410569 CLEC11AQ9Y240 323 aa9.77□□□□□ -0.85
RNU4-25P-201ENST00000410569 DCAF8L2P0C7V8 631 aa9.75□□□□□ -0.85
RNU4-25P-201ENST00000410569 CC2D2AQ9P2K1 1620 aa9.71□□□□□ -0.86
RNU4-25P-201ENST00000410569 SHROOM4Q9ULL8 1493 aa9.69□□□□□ -0.86
RNU4-25P-201ENST00000410569 PRR29P0C7W0 189 aa9.66□□□□□ -0.86
RNU4-25P-201ENST00000410569 CECR2Q9BXF3 1484 aa9.66□□□□□ -0.86
RNU4-25P-201ENST00000410569 PRKAR2AP13861 404 aaKnown RBP9.65□□□□□ -0.86
RNU4-25P-201ENST00000410569 ZCCHC6Q5VYS8 1495 aaKnown RBP9.65□□□□□ -0.87
RNU4-25P-201ENST00000410569 PROM2Q8N271 834 aa9.64□□□□□ -0.87
RNU4-25P-201ENST00000410569 SCRIBQ14160 1630 aa9.64□□□□□ -0.87
RNU4-25P-201ENST00000410569 EIF4G1Q04637 1599 aaKnown RBP9.63□□□□□ -0.87
RNU4-25P-201ENST00000410569 STAG3Q9UJ98 1225 aa9.62□□□□□ -0.87
RNU4-25P-201ENST00000410569 DCAF1Q9Y4B6 1507 aa9.61□□□□□ -0.87
RNU4-25P-201ENST00000410569 CHADLQ6NUI6 762 aa9.58□□□□□ -0.88
RNU4-25P-201ENST00000410569 HAX1O00165 279 aa9.54□□□□□ -0.88
RNU4-25P-201ENST00000410569 FKBP8Q14318 412 aa9.51□□□□□ -0.89
RNU4-25P-201ENST00000410569 CREBZFQ9NS37 354 aa9.5□□□□□ -0.89
RNU4-25P-201ENST00000410569 SP7Q8TDD2 431 aaPredicted RBP9.49□□□□□ -0.89
RNU4-25P-201ENST00000410569 C19orf67A6NJJ6 358 aa9.48□□□□□ -0.89
RNU4-25P-201ENST00000410569 FARP1Q9Y4F1 1045 aaPredicted RBP9.48□□□□□ -0.89
RNU4-25P-201ENST00000410569 EVX2Q03828 476 aa9.47□□□□□ -0.89
RNU4-25P-201ENST00000410569 DNAJC5Q9H3Z4 198 aa9.43□□□□□ -0.9
RNU4-25P-201ENST00000410569 MNX1P50219 401 aaPredicted RBP9.38□□□□□ -0.91
RNU4-25P-201ENST00000410569 CD44P16070 742 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms