Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 OR10R3P-201ENST00000361688 942 ntBASIC5.13□□□□□ -1.59
CACNA1BQ00975 RNA5SP30-201ENST00000365552 115 ntBASIC5.13□□□□□ -1.59
CACNA1BQ00975 NIFKP3-201ENST00000417799 865 ntBASIC5.13□□□□□ -1.59
CACNA1BQ00975 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 AL359265.2-201ENST00000434367 631 ntBASIC5.13□□□□□ -1.59
CACNA1BQ00975 RPL5P25-201ENST00000441148 775 ntBASIC5.13□□□□□ -1.59
CACNA1BQ00975 AC010618.1-201ENST00000469924 477 ntBASIC5.13□□□□□ -1.59
CACNA1BQ00975 RN7SL244P-201ENST00000493405 297 ntBASIC5.13□□□□□ -1.59
CACNA1BQ00975 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 AC023575.1-201ENST00000580510 358 ntBASIC5.13□□□□□ -1.59
CACNA1BQ00975 MIR3939-201ENST00000582614 106 ntBASIC5.13□□□□□ -1.59
CACNA1BQ00975 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CACNA1BQ00975 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CACNA1BQ00975 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CACNA1BQ00975 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 AC011379.1-201ENST00000508713 3025 ntBASIC5.13□□□□□ -1.59
CACNA1BQ00975 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CACNA1BQ00975 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CACNA1BQ00975 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CACNA1BQ00975 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CACNA1BQ00975 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CACNA1BQ00975 DSTNP5-201ENST00000427921 523 ntBASIC5.13□□□□□ -1.59
CACNA1BQ00975 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 AC025674.1-201ENST00000507074 324 ntBASIC5.13□□□□□ -1.59
CACNA1BQ00975 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 AC073581.1-201ENST00000519036 575 ntBASIC5.13□□□□□ -1.59
CACNA1BQ00975 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 AC020915.5-201ENST00000596836 964 ntBASIC5.13□□□□□ -1.59
CACNA1BQ00975 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 AC023043.4-201ENST00000612081 449 ntBASIC5.13□□□□□ -1.59
CACNA1BQ00975 AC004777.1-201ENST00000624317 287 ntBASIC5.13□□□□□ -1.59
CACNA1BQ00975 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CACNA1BQ00975 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CACNA1BQ00975 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CACNA1BQ00975 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CACNA1BQ00975 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CACNA1BQ00975 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CACNA1BQ00975 A2MP1-204ENST00000566278 4130 ntBASIC5.13□□□□□ -1.59
CACNA1BQ00975 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.13□□□□□ -1.59
CACNA1BQ00975 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CACNA1BQ00975 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CACNA1BQ00975 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CACNA1BQ00975 AC105235.1-201ENST00000623208 1816 ntBASIC5.12□□□□□ -1.59
CACNA1BQ00975 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 ELOCP19-201ENST00000411919 318 ntBASIC5.12□□□□□ -1.59
CACNA1BQ00975 PTCD2P2-201ENST00000415579 1095 ntBASIC5.12□□□□□ -1.59
CACNA1BQ00975 RPS3AP12-201ENST00000443616 753 ntBASIC5.12□□□□□ -1.59
CACNA1BQ00975 snoU13.29-201ENST00000459370 104 ntBASIC5.12□□□□□ -1.59
CACNA1BQ00975 AC015864.1-201ENST00000496512 544 ntBASIC5.12□□□□□ -1.59
CACNA1BQ00975 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.12□□□□□ -1.59
CACNA1BQ00975 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 AL132640.2-201ENST00000559968 1698 ntBASIC5.12□□□□□ -1.59
CACNA1BQ00975 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CACNA1BQ00975 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CACNA1BQ00975 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CACNA1BQ00975 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CACNA1BQ00975 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CACNA1BQ00975 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CACNA1BQ00975 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CACNA1BQ00975 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CACNA1BQ00975 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CACNA1BQ00975 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CACNA1BQ00975 CLCA3P-203ENST00000490028 2781 ntBASIC5.12□□□□□ -1.59
CACNA1BQ00975 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CACNA1BQ00975 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 CASKP1-201ENST00000412870 582 ntBASIC5.12□□□□□ -1.59
CACNA1BQ00975 RPL12P34-201ENST00000424532 479 ntBASIC5.12□□□□□ -1.59
CACNA1BQ00975 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 AC013356.1-201ENST00000489027 564 ntBASIC5.12□□□□□ -1.59
CACNA1BQ00975 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms