RNA–Protein interactions for RNA: ENST00000635048.1

LINC01748-204, Transcript of long intergenic non-protein coding RNA 1748, humanhuman

TSL 5 BASIC

Gene LINC01748, Length 5,678 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01748-204ENST00000635048 DCAF8L2P0C7V8 631 aa9.53□□□□□ -0.88
LINC01748-204ENST00000635048 NISCHQ9Y2I1 1504 aa8.66□□□□□ -1.02
LINC01748-204ENST00000635048 SUPT5HO00267 1087 aaKnown RBP8.47□□□□□ -1.05
LINC01748-204ENST00000635048 FAM9AQ8IZU1 332 aaPredicted RBP8.47□□□□□ -1.05
LINC01748-204ENST00000635048 SHROOM4Q9ULL8 1493 aa8.38□□□□□ -1.07
LINC01748-204ENST00000635048 EHMT2Q96KQ7 1210 aa8.24□□□□□ -1.09
LINC01748-204ENST00000635048 APLP2Q06481 763 aa8.18□□□□□ -1.1
LINC01748-204ENST00000635048 ATP1B4Q9UN42 357 aaPredicted RBP8.09□□□□□ -1.11
LINC01748-204ENST00000635048 RANGAP1P46060 587 aaPredicted RBP8.07□□□□□ -1.12
LINC01748-204ENST00000635048 ABCC9O60706 1549 aa8.06□□□□□ -1.12
LINC01748-204ENST00000635048 MYT1LQ9UL68 1186 aa8.04□□□□□ -1.12
LINC01748-204ENST00000635048 PABPN1Q86U42 306 aaKnown RBP eCLIP8.01□□□□□ -1.13
LINC01748-204ENST00000635048 TTBK1Q5TCY1 1321 aaPredicted RBP8.01□□□□□ -1.13
LINC01748-204ENST00000635048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.96□□□□□ -1.13
LINC01748-204ENST00000635048 HNRNPUL2Q1KMD3 747 aaKnown RBP7.96□□□□□ -1.13
LINC01748-204ENST00000635048 UBTFP17480 764 aaKnown RBP7.88□□□□□ -1.15
LINC01748-204ENST00000635048 TRIM41Q8WV44 630 aa7.87□□□□□ -1.15
LINC01748-204ENST00000635048 FBLN2P98095 1184 aa7.86□□□□□ -1.15
LINC01748-204ENST00000635048 CHIC1Q5VXU3 224 aa7.8□□□□□ -1.16
LINC01748-204ENST00000635048 NPM1P06748 294 aaKnown RBP eCLIP7.69□□□□□ -1.18
LINC01748-204ENST00000635048 ESF1Q9H501 851 aaKnown RBP7.64□□□□□ -1.19
LINC01748-204ENST00000635048 PLPPR3Q6T4P5 718 aa7.6□□□□□ -1.19
LINC01748-204ENST00000635048 BCANQ96GW7 911 aa7.58□□□□□ -1.2
LINC01748-204ENST00000635048 ITGAEP38570 1179 aa7.57□□□□□ -1.2
LINC01748-204ENST00000635048 SLC4A1APQ9BWU0 796 aaKnown RBP7.54□□□□□ -1.2
LINC01748-204ENST00000635048 TRHP20396 242 aaPredicted RBP7.54□□□□□ -1.2
LINC01748-204ENST00000635048 PCGF6Q9BYE7 350 aa7.53□□□□□ -1.2
LINC01748-204ENST00000635048 ARID3CA6NKF2 412 aa7.49□□□□□ -1.21
LINC01748-204ENST00000635048 POLR3GLQ9BT43 218 aa7.49□□□□□ -1.21
LINC01748-204ENST00000635048 CHMP7Q8WUX9 453 aaPredicted RBP7.47□□□□□ -1.21
LINC01748-204ENST00000635048 STAG3Q9UJ98 1225 aa7.45□□□□□ -1.22
LINC01748-204ENST00000635048 CDK11AQ9UQ88 783 aaPredicted RBP7.44□□□□□ -1.22
LINC01748-204ENST00000635048 CCER1Q8TC90 406 aaPredicted RBP7.43□□□□□ -1.22
LINC01748-204ENST00000635048 PPARGC1BQ86YN6 1023 aaKnown RBP7.43□□□□□ -1.22
LINC01748-204ENST00000635048 SCRIBQ14160 1630 aa7.41□□□□□ -1.22
LINC01748-204ENST00000635048 P3H3Q8IVL6 736 aa7.41□□□□□ -1.22
LINC01748-204ENST00000635048 ERCC6Q03468 1493 aa7.41□□□□□ -1.22
LINC01748-204ENST00000635048 ZNF777Q9ULD5 760 aaPredicted RBP7.41□□□□□ -1.22
LINC01748-204ENST00000635048 FAM50AQ14320 339 aaKnown RBP7.4□□□□□ -1.22
LINC01748-204ENST00000635048 TRIM52Q96A61 297 aa7.4□□□□□ -1.23
LINC01748-204ENST00000635048 CCDC180Q9P1Z9 1646 aa7.39□□□□□ -1.23
LINC01748-204ENST00000635048 ARID4BQ4LE39 1312 aaPredicted RBP7.38□□□□□ -1.23
LINC01748-204ENST00000635048 PELP1Q8IZL8 1130 aaKnown RBP7.38□□□□□ -1.23
LINC01748-204ENST00000635048 AEBP2Q6ZN18 517 aaPredicted RBP7.36□□□□□ -1.23
LINC01748-204ENST00000635048 CNGB1Q14028 1251 aaPredicted RBP7.36□□□□□ -1.23
LINC01748-204ENST00000635048 CHGAP10645 457 aaKnown RBP7.35□□□□□ -1.23
LINC01748-204ENST00000635048 SLC24A1O60721 1099 aa7.32□□□□□ -1.24
LINC01748-204ENST00000635048 RB1CC1Q8TDY2 1594 aa7.32□□□□□ -1.24
LINC01748-204ENST00000635048 KCNH8Q96L42 1107 aa7.31□□□□□ -1.24
LINC01748-204ENST00000635048 C14orf37Q86TY3 774 aa7.3□□□□□ -1.24
LINC01748-204ENST00000635048 ZNF326Q5BKZ1 582 aaKnown RBP7.3□□□□□ -1.24
LINC01748-204ENST00000635048 SCAF1Q9H7N4 1312 aaKnown RBP7.3□□□□□ -1.24
LINC01748-204ENST00000635048 A0A0G2JS52 829 aa7.27□□□□□ -1.24
LINC01748-204ENST00000635048 HAP1P54257 671 aaPredicted RBP7.24□□□□□ -1.25
LINC01748-204ENST00000635048 PPP1R15AO75807 674 aaPredicted RBP7.23□□□□□ -1.25
LINC01748-204ENST00000635048 TSPY4P0CV99 314 aa7.23□□□□□ -1.25
LINC01748-204ENST00000635048 TSPY10P0CW01 314 aa7.23□□□□□ -1.25
LINC01748-204ENST00000635048 CSRNP3Q8WYN3 585 aa7.23□□□□□ -1.25
LINC01748-204ENST00000635048 NEFMP07197 916 aa7.22□□□□□ -1.25
LINC01748-204ENST00000635048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.22□□□□□ -1.25
LINC01748-204ENST00000635048 LOC105371045A0A1W2PR82 267 aa7.21□□□□□ -1.25
LINC01748-204ENST00000635048 PLEKHD1A6NEE1 506 aa7.21□□□□□ -1.26
LINC01748-204ENST00000635048 PLEKHG5O94827 1062 aa7.21□□□□□ -1.26
LINC01748-204ENST00000635048 SENP3Q9H4L4 574 aaPredicted RBP7.18□□□□□ -1.26
LINC01748-204ENST00000635048 ZEB1P37275 1124 aaPredicted RBP7.18□□□□□ -1.26
LINC01748-204ENST00000635048 MLECQ14165 292 aa7.18□□□□□ -1.26
LINC01748-204ENST00000635048 NPM2Q86SE8 214 aaKnown RBP7.17□□□□□ -1.26
LINC01748-204ENST00000635048 NEFLP07196 543 aa7.17□□□□□ -1.26
LINC01748-204ENST00000635048 MYT1Q01538 1121 aa7.16□□□□□ -1.26
LINC01748-204ENST00000635048 NEUROD1Q13562 356 aa7.16□□□□□ -1.26
LINC01748-204ENST00000635048 CYB5RLQ6IPT4 315 aa7.16□□□□□ -1.26
LINC01748-204ENST00000635048 NACADO15069 1562 aa7.15□□□□□ -1.27
LINC01748-204ENST00000635048 BAZ1BQ9UIG0 1483 aaKnown RBP7.14□□□□□ -1.27
LINC01748-204ENST00000635048 OSCARQ8IYS5 282 aa7.13□□□□□ -1.27
LINC01748-204ENST00000635048 ZBTB7CA1YPR0 619 aa7.12□□□□□ -1.27
LINC01748-204ENST00000635048 DCAF1Q9Y4B6 1507 aa7.12□□□□□ -1.27
LINC01748-204ENST00000635048 LMOD2Q6P5Q4 547 aa7.12□□□□□ -1.27
LINC01748-204ENST00000635048 CECR2Q9BXF3 1484 aa7.11□□□□□ -1.27
LINC01748-204ENST00000635048 PDS5BQ9NTI5 1447 aa7.11□□□□□ -1.27
LINC01748-204ENST00000635048 ZBTB47Q9UFB7 747 aaPredicted RBP7.09□□□□□ -1.27
LINC01748-204ENST00000635048 CHIC2Q9UKJ5 165 aa7.09□□□□□ -1.27
LINC01748-204ENST00000635048 MTUS2Q5JR59 1369 aa7.09□□□□□ -1.27
LINC01748-204ENST00000635048 ZCCHC6Q5VYS8 1495 aaKnown RBP7.08□□□□□ -1.28
LINC01748-204ENST00000635048 CENPBP07199 599 aaPredicted RBP7.06□□□□□ -1.28
LINC01748-204ENST00000635048 TRIM26Q12899 539 aaPredicted RBP7.06□□□□□ -1.28
LINC01748-204ENST00000635048 MYO15BQ96JP2 1530 aa7.05□□□□□ -1.28
LINC01748-204ENST00000635048 CFDP1Q9UEE9 299 aaPredicted RBP7.05□□□□□ -1.28
LINC01748-204ENST00000635048 BCL11AQ9H165 835 aa7.04□□□□□ -1.28
LINC01748-204ENST00000635048 HDGFP51858 240 aaKnown RBP7.04□□□□□ -1.28
LINC01748-204ENST00000635048 CLSPNQ9HAW4 1339 aa7.03□□□□□ -1.28
LINC01748-204ENST00000635048 YTHDC1Q96MU7 727 aaKnown RBP7.03□□□□□ -1.28
LINC01748-204ENST00000635048 ERICH6Q7L0X2 663 aa7.03□□□□□ -1.28
LINC01748-204ENST00000635048 GGT6Q6P531 493 aa7.01□□□□□ -1.29
LINC01748-204ENST00000635048 ARXQ96QS3 562 aa7□□□□□ -1.29
LINC01748-204ENST00000635048 KDM2AQ9Y2K7 1162 aa7□□□□□ -1.29
LINC01748-204ENST00000635048 DAXXQ9UER7 740 aaPredicted RBP6.99□□□□□ -1.29
LINC01748-204ENST00000635048 NPHP1O15259 732 aa6.99□□□□□ -1.29
LINC01748-204ENST00000635048 CARMIL2Q6F5E8 1435 aa6.98□□□□□ -1.29
LINC01748-204ENST00000635048 KIF27Q86VH2 1401 aa6.98□□□□□ -1.29
LINC01748-204ENST00000635048 CCDC9Q9Y3X0 531 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms