Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.24
PCDHGA11Q9Y5H2 TRIM51HP-202ENST00000530412 1823 ntBASIC7.34□□□□□ -1.24
PCDHGA11Q9Y5H2 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AL353795.1-201ENST00000439134 1775 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AL513523.1-201ENST00000417868 1309 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 OSBPL9P1-201ENST00000604744 1469 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 Y_RNA.25-201ENST00000362528 102 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 SNORA63-201ENST00000363450 132 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 RN7SKP76-201ENST00000364419 323 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AL513185.2-201ENST00000425543 193 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 RPL35P8-201ENST00000433284 337 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AL137074.1-201ENST00000442640 465 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AL591438.2-201ENST00000452635 691 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 BX322784.1-201ENST00000455793 1077 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 TDGF1P6-201ENST00000463873 448 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AC091564.1-201ENST00000464563 479 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AC092757.1-201ENST00000467293 467 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 RN7SL332P-201ENST00000482163 254 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AF186996.3-201ENST00000509527 964 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AF235103.2-201ENST00000525753 346 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 SRMP2-201ENST00000553832 916 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 TRAV15-201ENST00000556680 249 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 MIR5697-201ENST00000578045 78 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 RPL35AP25-201ENST00000584631 330 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AL021918.1-201ENST00000603933 236 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AC112191.3-201ENST00000604371 277 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AL139286.1-201ENST00000604465 483 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 MEMO1P5-201ENST00000604810 406 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AC012488.1-201ENST00000611221 640 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 5S_rRNA.20-201ENST00000612104 118 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AL391903.2-201ENST00000614532 247 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AC010338.1-201ENST00000621823 717 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AC012100.3-201ENST00000624738 575 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AL049541.2-201ENST00000626377 555 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 MIR1321-201ENST00000637766 79 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 AC006026.1-201ENST00000444025 1803 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 UGT2B26P-201ENST00000508672 1613 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
PCDHGA11Q9Y5H2 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms