RNA–Protein interactions for RNA: ENST00000348603.2

CCNB3-202, Transcript of cyclin B3, humanhuman

TSL 1 (best) BASIC

Gene CCNB3, Length 1,201 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-202ENST00000348603 AEBP2Q6ZN18 517 aaPredicted RBP26.48■■□□□ 1.83
CCNB3-202ENST00000348603 CHIC1Q5VXU3 224 aa24.93■■□□□ 1.58
CCNB3-202ENST00000348603 SENP3Q9H4L4 574 aaPredicted RBP22.82■■□□□ 1.24
CCNB3-202ENST00000348603 PHF23Q9BUL5 403 aaPredicted RBP22.38■■□□□ 1.17
CCNB3-202ENST00000348603 FOXD1Q16676 465 aa21.22■□□□□ 0.99
CCNB3-202ENST00000348603 POTEDQ86YR6 584 aa20.37■□□□□ 0.85
CCNB3-202ENST00000348603 MSH5O43196 834 aa20.17■□□□□ 0.82
CCNB3-202ENST00000348603 PIAS4Q8N2W9 510 aaPredicted RBP19.79■□□□□ 0.76
CCNB3-202ENST00000348603 PLPPR3Q6T4P5 718 aa19.66■□□□□ 0.74
CCNB3-202ENST00000348603 PPP6R1Q9UPN7 881 aa19.42■□□□□ 0.7
CCNB3-202ENST00000348603 ADRA2BP18089 450 aa19.37■□□□□ 0.69
CCNB3-202ENST00000348603 DMRT2Q9Y5R5 561 aa17.98■□□□□ 0.47
CCNB3-202ENST00000348603 SCAF1Q9H7N4 1312 aaKnown RBP17.92■□□□□ 0.46
CCNB3-202ENST00000348603 MAPK8IP2Q13387 824 aaPredicted RBP17.9■□□□□ 0.46
CCNB3-202ENST00000348603 CACNB1Q02641 598 aaPredicted RBP17.57■□□□□ 0.4
CCNB3-202ENST00000348603 DCAF8L1A6NGE4 600 aa17.31■□□□□ 0.36
CCNB3-202ENST00000348603 HOXD11P31277 338 aaPredicted RBP17.13■□□□□ 0.33
CCNB3-202ENST00000348603 PPP4R3CPQ6ZMV5 832 aa17.12■□□□□ 0.33
CCNB3-202ENST00000348603 RNF39Q9H2S5 420 aa17.09■□□□□ 0.33
CCNB3-202ENST00000348603 CNKSR2Q8WXI2 1034 aa16.95■□□□□ 0.3
CCNB3-202ENST00000348603 RNF216Q9NWF9 866 aaPredicted RBP16.91■□□□□ 0.3
CCNB3-202ENST00000348603 C1QBPQ07021 282 aaKnown RBP16.87■□□□□ 0.29
CCNB3-202ENST00000348603 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
CCNB3-202ENST00000348603 NCBP3Q53F19 620 aaKnown RBP16.43■□□□□ 0.22
CCNB3-202ENST00000348603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.38■□□□□ 0.21
CCNB3-202ENST00000348603 NPM3O75607 178 aaKnown RBP16.05■□□□□ 0.16
CCNB3-202ENST00000348603 POTEHQ6S545 545 aa15.91■□□□□ 0.14
CCNB3-202ENST00000348603 U3KPZ7 1027 aaPredicted RBP15.9■□□□□ 0.14
CCNB3-202ENST00000348603 CAPN15O75808 1086 aa15.88■□□□□ 0.13
CCNB3-202ENST00000348603 DSG3P32926 999 aa15.83■□□□□ 0.12
CCNB3-202ENST00000348603 SPINK5Q9NQ38 1064 aaPredicted RBP15.79■□□□□ 0.12
CCNB3-202ENST00000348603 APLP2Q06481 763 aa15.62■□□□□ 0.09
CCNB3-202ENST00000348603 ZNF219Q9P2Y4 722 aaPredicted RBP15.51■□□□□ 0.07
CCNB3-202ENST00000348603 TRHP20396 242 aaPredicted RBP15.49■□□□□ 0.07
CCNB3-202ENST00000348603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.44■□□□□ 0.06
CCNB3-202ENST00000348603 HNRNPUL2Q1KMD3 747 aaKnown RBP15.44■□□□□ 0.06
CCNB3-202ENST00000348603 ABCB7O75027 752 aa15.41■□□□□ 0.06
CCNB3-202ENST00000348603 SLC4A2P04920 1241 aa15.41■□□□□ 0.06
CCNB3-202ENST00000348603 KCNA4P22459 653 aa15.3■□□□□ 0.04
CCNB3-202ENST00000348603 SAMD1Q6SPF0 538 aaPredicted RBP15.29■□□□□ 0.04
CCNB3-202ENST00000348603 RBM42Q9BTD8 480 aaKnown RBP15.25■□□□□ 0.03
CCNB3-202ENST00000348603 CHRDL2Q6WN34 429 aa15.02■□□□□ -0
CCNB3-202ENST00000348603 POLA2Q14181 598 aa14.95□□□□□ -0.02
CCNB3-202ENST00000348603 MYCNP04198 464 aaPredicted RBP14.94□□□□□ -0.02
CCNB3-202ENST00000348603 AKT1S1Q96B36 256 aa14.75□□□□□ -0.05
CCNB3-202ENST00000348603 ZBTB12Q9Y330 459 aaPredicted RBP14.73□□□□□ -0.05
CCNB3-202ENST00000348603 SP7Q8TDD2 431 aaPredicted RBP14.71□□□□□ -0.05
CCNB3-202ENST00000348603 REM2Q8IYK8 340 aaPredicted RBP14.56□□□□□ -0.08
CCNB3-202ENST00000348603 PIP4P2Q8N4L2 257 aa14.53□□□□□ -0.08
CCNB3-202ENST00000348603 FOXD4L1Q9NU39 408 aa14.51□□□□□ -0.09
CCNB3-202ENST00000348603 ATF5Q9Y2D1 282 aaPredicted RBP14.49□□□□□ -0.09
CCNB3-202ENST00000348603 OSCARQ8IYS5 282 aa14.48□□□□□ -0.09
CCNB3-202ENST00000348603 HAX1O00165 279 aa14.45□□□□□ -0.1
CCNB3-202ENST00000348603 SLC4A1APQ9BWU0 796 aaKnown RBP14.43□□□□□ -0.1
CCNB3-202ENST00000348603 PITPNM1O00562 1244 aa14.4□□□□□ -0.1
CCNB3-202ENST00000348603 FXR2P51116 673 aaKnown RBP eCLIP14.37□□□□□ -0.11
CCNB3-202ENST00000348603 SPDYE2BA6NHP3 402 aa14.18□□□□□ -0.14
CCNB3-202ENST00000348603 SPDYE6P0CI01 402 aa14.18□□□□□ -0.14
CCNB3-202ENST00000348603 SPDYE2Q495Y8 402 aa14.18□□□□□ -0.14
CCNB3-202ENST00000348603 ATXN8OSP0DMR3 200 aa14.15□□□□□ -0.14
CCNB3-202ENST00000348603 FBLN2P98095 1184 aa14.15□□□□□ -0.14
CCNB3-202ENST00000348603 EVX2Q03828 476 aa14.09□□□□□ -0.15
CCNB3-202ENST00000348603 PRKAR2AP13861 404 aaKnown RBP14.05□□□□□ -0.16
CCNB3-202ENST00000348603 SPDYE1Q8NFV5 336 aaPredicted RBP14.05□□□□□ -0.16
CCNB3-202ENST00000348603 CLEC11AQ9Y240 323 aa14.03□□□□□ -0.16
CCNB3-202ENST00000348603 ZBTB22O15209 634 aa14□□□□□ -0.17
CCNB3-202ENST00000348603 C19orf67A6NJJ6 358 aa13.94□□□□□ -0.18
CCNB3-202ENST00000348603 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
CCNB3-202ENST00000348603 SSUH2Q9Y2M2 353 aa13.87□□□□□ -0.19
CCNB3-202ENST00000348603 GABBR2O75899 941 aa13.84□□□□□ -0.19
CCNB3-202ENST00000348603 MKRN4PQ13434 485 aaPredicted RBP13.81□□□□□ -0.2
CCNB3-202ENST00000348603 LHX8Q68G74 356 aa13.79□□□□□ -0.2
CCNB3-202ENST00000348603 PRR29P0C7W0 189 aa13.75□□□□□ -0.21
CCNB3-202ENST00000348603 CHADLQ6NUI6 762 aa13.74□□□□□ -0.21
CCNB3-202ENST00000348603 PABPN1Q86U42 306 aaKnown RBP eCLIP13.67□□□□□ -0.22
CCNB3-202ENST00000348603 CLCN6P51797 869 aa13.61□□□□□ -0.23
CCNB3-202ENST00000348603 CD44P16070 742 aaKnown RBP13.59□□□□□ -0.23
CCNB3-202ENST00000348603 FARP1Q9Y4F1 1045 aaPredicted RBP13.53□□□□□ -0.24
CCNB3-202ENST00000348603 POTEIP0CG38 1075 aa13.47□□□□□ -0.25
CCNB3-202ENST00000348603 DCBLD2Q96PD2 775 aa13.45□□□□□ -0.26
CCNB3-202ENST00000348603 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
CCNB3-202ENST00000348603 ZRANB1Q9UGI0 708 aa13.33□□□□□ -0.28
CCNB3-202ENST00000348603 PLSCR2Q9NRY7 297 aa13.32□□□□□ -0.28
CCNB3-202ENST00000348603 STAG3Q9UJ98 1225 aa13.29□□□□□ -0.28
CCNB3-202ENST00000348603 PAK3O75914 559 aaPredicted RBP13.22□□□□□ -0.29
CCNB3-202ENST00000348603 CREBZFQ9NS37 354 aa13.21□□□□□ -0.29
CCNB3-202ENST00000348603 GALR2O43603 387 aaPredicted RBP13.17□□□□□ -0.3
CCNB3-202ENST00000348603 OTUD5Q96G74 571 aa13.1□□□□□ -0.31
CCNB3-202ENST00000348603 NPM1P06748 294 aaKnown RBP eCLIP13.09□□□□□ -0.31
CCNB3-202ENST00000348603 PHF12Q96QT6 1004 aa13.05□□□□□ -0.32
CCNB3-202ENST00000348603 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.33
CCNB3-202ENST00000348603 POTEMA6NI47 508 aa13□□□□□ -0.33
CCNB3-202ENST00000348603 POTEB2H3BUK9 544 aa13□□□□□ -0.33
CCNB3-202ENST00000348603 CSRNP3Q8WYN3 585 aa12.97□□□□□ -0.33
CCNB3-202ENST00000348603 POTEGQ6S5H5 508 aa12.95□□□□□ -0.34
CCNB3-202ENST00000348603 ASTLQ6HA08 431 aaPredicted RBP12.91□□□□□ -0.34
CCNB3-202ENST00000348603 MAMSTRQ6ZN01 415 aa12.91□□□□□ -0.34
CCNB3-202ENST00000348603 PELP1Q8IZL8 1130 aaKnown RBP12.91□□□□□ -0.34
CCNB3-202ENST00000348603 SLC39A7Q92504 469 aa12.91□□□□□ -0.34
CCNB3-202ENST00000348603 PCDH10Q9P2E7 1040 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms