RNA–Protein interactions for RNA: ENST00000428205.1

AP001117.1-201, humanhuman

TSL 2 BASIC

Gene AP001117.1, Length 609 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001117.1-201ENST00000428205 AEBP2Q6ZN18 517 aaPredicted RBP22.06■■□□□ 1.12
AP001117.1-201ENST00000428205 CHIC1Q5VXU3 224 aa21.24■□□□□ 0.99
AP001117.1-201ENST00000428205 SENP3Q9H4L4 574 aaPredicted RBP18.86■□□□□ 0.61
AP001117.1-201ENST00000428205 PHF23Q9BUL5 403 aaPredicted RBP18.6■□□□□ 0.57
AP001117.1-201ENST00000428205 FOXD1Q16676 465 aa17.49■□□□□ 0.39
AP001117.1-201ENST00000428205 PLPPR3Q6T4P5 718 aa17.11■□□□□ 0.33
AP001117.1-201ENST00000428205 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
AP001117.1-201ENST00000428205 ADRA2BP18089 450 aa16.48■□□□□ 0.23
AP001117.1-201ENST00000428205 PIAS4Q8N2W9 510 aaPredicted RBP16.44■□□□□ 0.22
AP001117.1-201ENST00000428205 MSH5O43196 834 aa16.35■□□□□ 0.21
AP001117.1-201ENST00000428205 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
AP001117.1-201ENST00000428205 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
AP001117.1-201ENST00000428205 MAPK8IP2Q13387 824 aaPredicted RBP15.04■□□□□ -0
AP001117.1-201ENST00000428205 PPP4R3CPQ6ZMV5 832 aa14.99□□□□□ -0.01
AP001117.1-201ENST00000428205 DMRT2Q9Y5R5 561 aa14.98□□□□□ -0.01
AP001117.1-201ENST00000428205 CNKSR2Q8WXI2 1034 aa14.68□□□□□ -0.06
AP001117.1-201ENST00000428205 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
AP001117.1-201ENST00000428205 HOXD11P31277 338 aaPredicted RBP14.52□□□□□ -0.09
AP001117.1-201ENST00000428205 RNF216Q9NWF9 866 aaPredicted RBP14.49□□□□□ -0.09
AP001117.1-201ENST00000428205 DCAF8L1A6NGE4 600 aa14.33□□□□□ -0.12
AP001117.1-201ENST00000428205 NPM3O75607 178 aaKnown RBP14.28□□□□□ -0.12
AP001117.1-201ENST00000428205 KCNA4P22459 653 aa14.21□□□□□ -0.13
AP001117.1-201ENST00000428205 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
AP001117.1-201ENST00000428205 RNF39Q9H2S5 420 aa13.94□□□□□ -0.18
AP001117.1-201ENST00000428205 CACNB1Q02641 598 aaPredicted RBP13.84□□□□□ -0.19
AP001117.1-201ENST00000428205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.84□□□□□ -0.19
AP001117.1-201ENST00000428205 C1QBPQ07021 282 aaKnown RBP13.77□□□□□ -0.21
AP001117.1-201ENST00000428205 U3KPZ7 1027 aaPredicted RBP13.56□□□□□ -0.24
AP001117.1-201ENST00000428205 SLC4A2P04920 1241 aa13.55□□□□□ -0.24
AP001117.1-201ENST00000428205 SLC4A1APQ9BWU0 796 aaKnown RBP13.49□□□□□ -0.25
AP001117.1-201ENST00000428205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.33□□□□□ -0.28
AP001117.1-201ENST00000428205 HNRNPUL2Q1KMD3 747 aaKnown RBP13.33□□□□□ -0.28
AP001117.1-201ENST00000428205 APLP2Q06481 763 aa13.3□□□□□ -0.28
AP001117.1-201ENST00000428205 CAPN15O75808 1086 aa13.27□□□□□ -0.29
AP001117.1-201ENST00000428205 SPINK5Q9NQ38 1064 aaPredicted RBP13.27□□□□□ -0.29
AP001117.1-201ENST00000428205 MYCNP04198 464 aaPredicted RBP13.25□□□□□ -0.29
AP001117.1-201ENST00000428205 SAMD1Q6SPF0 538 aaPredicted RBP13.25□□□□□ -0.29
AP001117.1-201ENST00000428205 FOXD4L1Q9NU39 408 aa13.23□□□□□ -0.29
AP001117.1-201ENST00000428205 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
AP001117.1-201ENST00000428205 DSG3P32926 999 aa13.11□□□□□ -0.31
AP001117.1-201ENST00000428205 TRHP20396 242 aaPredicted RBP13.1□□□□□ -0.31
AP001117.1-201ENST00000428205 ZBTB22O15209 634 aa13.05□□□□□ -0.32
AP001117.1-201ENST00000428205 ABCB7O75027 752 aa12.96□□□□□ -0.33
AP001117.1-201ENST00000428205 ATF5Q9Y2D1 282 aaPredicted RBP12.84□□□□□ -0.35
AP001117.1-201ENST00000428205 ATXN8OSP0DMR3 200 aa12.82□□□□□ -0.36
AP001117.1-201ENST00000428205 POLA2Q14181 598 aa12.79□□□□□ -0.36
AP001117.1-201ENST00000428205 CSRNP3Q8WYN3 585 aa12.67□□□□□ -0.38
AP001117.1-201ENST00000428205 EHMT2Q96KQ7 1210 aa12.66□□□□□ -0.38
AP001117.1-201ENST00000428205 ZBTB12Q9Y330 459 aaPredicted RBP12.65□□□□□ -0.38
AP001117.1-201ENST00000428205 RBM42Q9BTD8 480 aaKnown RBP12.59□□□□□ -0.39
AP001117.1-201ENST00000428205 FBLN2P98095 1184 aa12.41□□□□□ -0.42
AP001117.1-201ENST00000428205 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
AP001117.1-201ENST00000428205 AKT1S1Q96B36 256 aa12.31□□□□□ -0.44
AP001117.1-201ENST00000428205 MKRN4PQ13434 485 aaPredicted RBP12.28□□□□□ -0.44
AP001117.1-201ENST00000428205 SPDYE2BA6NHP3 402 aa12.24□□□□□ -0.45
AP001117.1-201ENST00000428205 SPDYE6P0CI01 402 aa12.24□□□□□ -0.45
AP001117.1-201ENST00000428205 SPDYE2Q495Y8 402 aa12.24□□□□□ -0.45
AP001117.1-201ENST00000428205 POTEHQ6S545 545 aa12.19□□□□□ -0.46
AP001117.1-201ENST00000428205 CHRDL2Q6WN34 429 aa12.16□□□□□ -0.46
AP001117.1-201ENST00000428205 REM2Q8IYK8 340 aaPredicted RBP12.16□□□□□ -0.46
AP001117.1-201ENST00000428205 ZNF692Q9BU19 519 aaPredicted RBP12.1□□□□□ -0.47
AP001117.1-201ENST00000428205 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
AP001117.1-201ENST00000428205 PITPNM1O00562 1244 aa12.04□□□□□ -0.48
AP001117.1-201ENST00000428205 SPDYE1Q8NFV5 336 aaPredicted RBP11.97□□□□□ -0.49
AP001117.1-201ENST00000428205 PABPN1Q86U42 306 aaKnown RBP eCLIP11.93□□□□□ -0.5
AP001117.1-201ENST00000428205 PIP4P2Q8N4L2 257 aa11.9□□□□□ -0.5
AP001117.1-201ENST00000428205 CLEC11AQ9Y240 323 aa11.89□□□□□ -0.51
AP001117.1-201ENST00000428205 FXR2P51116 673 aaKnown RBP eCLIP11.88□□□□□ -0.51
AP001117.1-201ENST00000428205 SPDYE4A6NLX3 237 aa11.86□□□□□ -0.51
AP001117.1-201ENST00000428205 PRR29P0C7W0 189 aa11.74□□□□□ -0.53
AP001117.1-201ENST00000428205 PRKAR2AP13861 404 aaKnown RBP11.73□□□□□ -0.53
AP001117.1-201ENST00000428205 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
AP001117.1-201ENST00000428205 HAX1O00165 279 aa11.63□□□□□ -0.55
AP001117.1-201ENST00000428205 CHADLQ6NUI6 762 aa11.62□□□□□ -0.55
AP001117.1-201ENST00000428205 PROM2Q8N271 834 aa11.62□□□□□ -0.55
AP001117.1-201ENST00000428205 SP7Q8TDD2 431 aaPredicted RBP11.55□□□□□ -0.56
AP001117.1-201ENST00000428205 FKBP8Q14318 412 aa11.51□□□□□ -0.57
AP001117.1-201ENST00000428205 FARP1Q9Y4F1 1045 aaPredicted RBP11.51□□□□□ -0.57
AP001117.1-201ENST00000428205 C19orf67A6NJJ6 358 aa11.5□□□□□ -0.57
AP001117.1-201ENST00000428205 CREBZFQ9NS37 354 aa11.49□□□□□ -0.57
AP001117.1-201ENST00000428205 EVX2Q03828 476 aa11.44□□□□□ -0.58
AP001117.1-201ENST00000428205 CD44P16070 742 aaKnown RBP11.39□□□□□ -0.59
AP001117.1-201ENST00000428205 NPM1P06748 294 aaKnown RBP eCLIP11.34□□□□□ -0.59
AP001117.1-201ENST00000428205 MNX1P50219 401 aaPredicted RBP11.32□□□□□ -0.6
AP001117.1-201ENST00000428205 PLEKHG5O94827 1062 aa11.31□□□□□ -0.6
AP001117.1-201ENST00000428205 PAK3O75914 559 aaPredicted RBP11.27□□□□□ -0.61
AP001117.1-201ENST00000428205 MIER1Q8N108 512 aa11.27□□□□□ -0.61
AP001117.1-201ENST00000428205 GABBR2O75899 941 aa11.25□□□□□ -0.61
AP001117.1-201ENST00000428205 ZRANB1Q9UGI0 708 aa11.25□□□□□ -0.61
AP001117.1-201ENST00000428205 FBXO3Q9UK99 471 aa11.25□□□□□ -0.61
AP001117.1-201ENST00000428205 ZNF579Q8NAF0 562 aaKnown RBP11.24□□□□□ -0.61
AP001117.1-201ENST00000428205 CLCN6P51797 869 aa11.23□□□□□ -0.61
AP001117.1-201ENST00000428205 PLCD3Q8N3E9 789 aa11.23□□□□□ -0.61
AP001117.1-201ENST00000428205 ZBTB47Q9UFB7 747 aaPredicted RBP11.19□□□□□ -0.62
AP001117.1-201ENST00000428205 PHF12Q96QT6 1004 aa11.11□□□□□ -0.63
AP001117.1-201ENST00000428205 TSPYL2Q9H2G4 693 aaPredicted RBP11.09□□□□□ -0.63
AP001117.1-201ENST00000428205 VASPP50552 380 aaPredicted RBP11.08□□□□□ -0.64
AP001117.1-201ENST00000428205 RASEFQ8IZ41 740 aa11.06□□□□□ -0.64
AP001117.1-201ENST00000428205 CCDC61Q9Y6R9 512 aa11.05□□□□□ -0.64
AP001117.1-201ENST00000428205 GALR2O43603 387 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms