RNA–Protein interactions for RNA: ENST00000592426.5

TUBD1-214, Transcript of tubulin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBD1, Length 1,460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-214ENST00000592426 AEBP2Q6ZN18 517 aaPredicted RBP22.47■■□□□ 1.19
TUBD1-214ENST00000592426 CHIC1Q5VXU3 224 aa21.3■■□□□ 1
TUBD1-214ENST00000592426 SENP3Q9H4L4 574 aaPredicted RBP19.3■□□□□ 0.68
TUBD1-214ENST00000592426 PHF23Q9BUL5 403 aaPredicted RBP18.94■□□□□ 0.62
TUBD1-214ENST00000592426 FOXD1Q16676 465 aa17.9■□□□□ 0.46
TUBD1-214ENST00000592426 PLPPR3Q6T4P5 718 aa16.99■□□□□ 0.31
TUBD1-214ENST00000592426 MSH5O43196 834 aa16.92■□□□□ 0.3
TUBD1-214ENST00000592426 PIAS4Q8N2W9 510 aaPredicted RBP16.73■□□□□ 0.27
TUBD1-214ENST00000592426 POTEDQ86YR6 584 aa16.62■□□□□ 0.25
TUBD1-214ENST00000592426 PPP6R1Q9UPN7 881 aa16.59■□□□□ 0.25
TUBD1-214ENST00000592426 ADRA2BP18089 450 aa16.54■□□□□ 0.24
TUBD1-214ENST00000592426 DMRT2Q9Y5R5 561 aa15.27■□□□□ 0.04
TUBD1-214ENST00000592426 SCAF1Q9H7N4 1312 aaKnown RBP15.26■□□□□ 0.03
TUBD1-214ENST00000592426 MAPK8IP2Q13387 824 aaPredicted RBP15.19■□□□□ 0.02
TUBD1-214ENST00000592426 PPP4R3CPQ6ZMV5 832 aa14.82□□□□□ -0.04
TUBD1-214ENST00000592426 HOXD11P31277 338 aaPredicted RBP14.67□□□□□ -0.06
TUBD1-214ENST00000592426 CNKSR2Q8WXI2 1034 aa14.62□□□□□ -0.07
TUBD1-214ENST00000592426 DCAF8L1A6NGE4 600 aa14.54□□□□□ -0.08
TUBD1-214ENST00000592426 RNF216Q9NWF9 866 aaPredicted RBP14.53□□□□□ -0.08
TUBD1-214ENST00000592426 CACNB1Q02641 598 aaPredicted RBP14.5□□□□□ -0.09
TUBD1-214ENST00000592426 RNF39Q9H2S5 420 aa14.38□□□□□ -0.11
TUBD1-214ENST00000592426 DNAJC5BQ9UF47 199 aa14.3□□□□□ -0.12
TUBD1-214ENST00000592426 NCBP3Q53F19 620 aaKnown RBP14.28□□□□□ -0.12
TUBD1-214ENST00000592426 C1QBPQ07021 282 aaKnown RBP14.2□□□□□ -0.14
TUBD1-214ENST00000592426 NPM3O75607 178 aaKnown RBP14□□□□□ -0.17
TUBD1-214ENST00000592426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.92□□□□□ -0.18
TUBD1-214ENST00000592426 U3KPZ7 1027 aaPredicted RBP13.62□□□□□ -0.23
TUBD1-214ENST00000592426 KCNA4P22459 653 aa13.6□□□□□ -0.23
TUBD1-214ENST00000592426 CAPN15O75808 1086 aa13.42□□□□□ -0.26
TUBD1-214ENST00000592426 SPINK5Q9NQ38 1064 aaPredicted RBP13.41□□□□□ -0.26
TUBD1-214ENST00000592426 DSG3P32926 999 aa13.4□□□□□ -0.26
TUBD1-214ENST00000592426 SLC4A2P04920 1241 aa13.39□□□□□ -0.27
TUBD1-214ENST00000592426 APLP2Q06481 763 aa13.36□□□□□ -0.27
TUBD1-214ENST00000592426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.3□□□□□ -0.28
TUBD1-214ENST00000592426 HNRNPUL2Q1KMD3 747 aaKnown RBP13.3□□□□□ -0.28
TUBD1-214ENST00000592426 ZNF219Q9P2Y4 722 aaPredicted RBP13.25□□□□□ -0.29
TUBD1-214ENST00000592426 SAMD1Q6SPF0 538 aaPredicted RBP13.19□□□□□ -0.3
TUBD1-214ENST00000592426 TRHP20396 242 aaPredicted RBP13.15□□□□□ -0.3
TUBD1-214ENST00000592426 ABCB7O75027 752 aa13.05□□□□□ -0.32
TUBD1-214ENST00000592426 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
TUBD1-214ENST00000592426 POTEHQ6S545 545 aa13.02□□□□□ -0.33
TUBD1-214ENST00000592426 RBM42Q9BTD8 480 aaKnown RBP12.88□□□□□ -0.35
TUBD1-214ENST00000592426 SLC4A1APQ9BWU0 796 aaKnown RBP12.85□□□□□ -0.35
TUBD1-214ENST00000592426 FOXD4L1Q9NU39 408 aa12.81□□□□□ -0.36
TUBD1-214ENST00000592426 POLA2Q14181 598 aa12.78□□□□□ -0.36
TUBD1-214ENST00000592426 EHMT2Q96KQ7 1210 aa12.77□□□□□ -0.37
TUBD1-214ENST00000592426 ZBTB12Q9Y330 459 aaPredicted RBP12.66□□□□□ -0.38
TUBD1-214ENST00000592426 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
TUBD1-214ENST00000592426 CHRDL2Q6WN34 429 aa12.57□□□□□ -0.4
TUBD1-214ENST00000592426 AKT1S1Q96B36 256 aa12.52□□□□□ -0.41
TUBD1-214ENST00000592426 ZBTB22O15209 634 aa12.49□□□□□ -0.41
TUBD1-214ENST00000592426 ATXN8OSP0DMR3 200 aa12.47□□□□□ -0.41
TUBD1-214ENST00000592426 OSCARQ8IYS5 282 aa12.41□□□□□ -0.42
TUBD1-214ENST00000592426 CSRNP3Q8WYN3 585 aa12.37□□□□□ -0.43
TUBD1-214ENST00000592426 REM2Q8IYK8 340 aaPredicted RBP12.34□□□□□ -0.43
TUBD1-214ENST00000592426 FBLN2P98095 1184 aa12.23□□□□□ -0.45
TUBD1-214ENST00000592426 SPDYE2BA6NHP3 402 aa12.22□□□□□ -0.45
TUBD1-214ENST00000592426 SPDYE6P0CI01 402 aa12.22□□□□□ -0.45
TUBD1-214ENST00000592426 SPDYE2Q495Y8 402 aa12.22□□□□□ -0.45
TUBD1-214ENST00000592426 PIP4P2Q8N4L2 257 aa12.22□□□□□ -0.45
TUBD1-214ENST00000592426 PITPNM1O00562 1244 aa12.21□□□□□ -0.45
TUBD1-214ENST00000592426 SP7Q8TDD2 431 aaPredicted RBP12.17□□□□□ -0.46
TUBD1-214ENST00000592426 FXR2P51116 673 aaKnown RBP eCLIP12.16□□□□□ -0.46
TUBD1-214ENST00000592426 MKRN4PQ13434 485 aaPredicted RBP12.06□□□□□ -0.48
TUBD1-214ENST00000592426 SSUH2Q9Y2M2 353 aa12.03□□□□□ -0.48
TUBD1-214ENST00000592426 SPDYE1Q8NFV5 336 aaPredicted RBP12.02□□□□□ -0.49
TUBD1-214ENST00000592426 HAX1O00165 279 aa12□□□□□ -0.49
TUBD1-214ENST00000592426 ZNF692Q9BU19 519 aaPredicted RBP11.97□□□□□ -0.49
TUBD1-214ENST00000592426 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
TUBD1-214ENST00000592426 PRKAR2AP13861 404 aaKnown RBP11.89□□□□□ -0.51
TUBD1-214ENST00000592426 EVX2Q03828 476 aa11.79□□□□□ -0.52
TUBD1-214ENST00000592426 PABPN1Q86U42 306 aaKnown RBP eCLIP11.79□□□□□ -0.52
TUBD1-214ENST00000592426 C19orf67A6NJJ6 358 aa11.77□□□□□ -0.52
TUBD1-214ENST00000592426 PRR29P0C7W0 189 aa11.74□□□□□ -0.53
TUBD1-214ENST00000592426 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
TUBD1-214ENST00000592426 GABBR2O75899 941 aa11.58□□□□□ -0.56
TUBD1-214ENST00000592426 FARP1Q9Y4F1 1045 aaPredicted RBP11.56□□□□□ -0.56
TUBD1-214ENST00000592426 STAG3Q9UJ98 1225 aa11.53□□□□□ -0.56
TUBD1-214ENST00000592426 CD44P16070 742 aaKnown RBP11.52□□□□□ -0.56
TUBD1-214ENST00000592426 CLCN6P51797 869 aa11.52□□□□□ -0.56
TUBD1-214ENST00000592426 SPDYE4A6NLX3 237 aa11.45□□□□□ -0.58
TUBD1-214ENST00000592426 CREBZFQ9NS37 354 aa11.42□□□□□ -0.58
TUBD1-214ENST00000592426 ZNF579Q8NAF0 562 aaKnown RBP11.39□□□□□ -0.59
TUBD1-214ENST00000592426 LHX8Q68G74 356 aa11.38□□□□□ -0.59
TUBD1-214ENST00000592426 POTEIP0CG38 1075 aa11.32□□□□□ -0.6
TUBD1-214ENST00000592426 ZRANB1Q9UGI0 708 aa11.32□□□□□ -0.6
TUBD1-214ENST00000592426 PAK3O75914 559 aaPredicted RBP11.27□□□□□ -0.6
TUBD1-214ENST00000592426 DCBLD2Q96PD2 775 aa11.27□□□□□ -0.6
TUBD1-214ENST00000592426 NPM1P06748 294 aaKnown RBP eCLIP11.25□□□□□ -0.61
TUBD1-214ENST00000592426 PROM2Q8N271 834 aa11.23□□□□□ -0.61
TUBD1-214ENST00000592426 MNX1P50219 401 aaPredicted RBP11.21□□□□□ -0.61
TUBD1-214ENST00000592426 FKBP8Q14318 412 aa11.19□□□□□ -0.62
TUBD1-214ENST00000592426 GALR2O43603 387 aaPredicted RBP11.18□□□□□ -0.62
TUBD1-214ENST00000592426 PHF12Q96QT6 1004 aa11.12□□□□□ -0.63
TUBD1-214ENST00000592426 PLEKHG5O94827 1062 aa11.01□□□□□ -0.65
TUBD1-214ENST00000592426 ASTLQ6HA08 431 aaPredicted RBP11□□□□□ -0.65
TUBD1-214ENST00000592426 MS4A3Q96HJ5 214 aa11□□□□□ -0.65
TUBD1-214ENST00000592426 CCDC61Q9Y6R9 512 aa10.98□□□□□ -0.65
TUBD1-214ENST00000592426 TSPYL2Q9H2G4 693 aaPredicted RBP10.95□□□□□ -0.66
TUBD1-214ENST00000592426 ATMINO43313 823 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 1432.9 ms