Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
CNGA1P29973 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CNGA1P29973 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7□□□□□ -1.29
CNGA1P29973 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CNGA1P29973 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CNGA1P29973 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7□□□□□ -1.29
CNGA1P29973 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7□□□□□ -1.29
CNGA1P29973 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7□□□□□ -1.29
CNGA1P29973 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7□□□□□ -1.29
CNGA1P29973 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
CNGA1P29973 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CNGA1P29973 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CNGA1P29973 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CNGA1P29973 CRP-204ENST00000368112 787 ntTSL 2 BASIC7□□□□□ -1.29
CNGA1P29973 RNU6-468P-201ENST00000384003 109 ntBASIC7□□□□□ -1.29
CNGA1P29973 RNU6-584P-201ENST00000410350 95 ntBASIC7□□□□□ -1.29
CNGA1P29973 VN1R51P-201ENST00000411675 945 ntBASIC7□□□□□ -1.29
CNGA1P29973 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC7□□□□□ -1.29
CNGA1P29973 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7□□□□□ -1.29
CNGA1P29973 RPS27P5-201ENST00000444247 244 ntBASIC7□□□□□ -1.29
CNGA1P29973 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC7□□□□□ -1.29
CNGA1P29973 AC006539.1-201ENST00000481419 501 ntBASIC7□□□□□ -1.29
CNGA1P29973 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7□□□□□ -1.29
CNGA1P29973 AP001858.2-201ENST00000536213 601 ntBASIC7□□□□□ -1.29
CNGA1P29973 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CNGA1P29973 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7□□□□□ -1.29
CNGA1P29973 AC073916.1-201ENST00000545095 130 ntBASIC7□□□□□ -1.29
CNGA1P29973 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7□□□□□ -1.29
CNGA1P29973 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CNGA1P29973 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7□□□□□ -1.29
CNGA1P29973 SNORD39.2-201ENST00000579995 76 ntBASIC7□□□□□ -1.29
CNGA1P29973 RN7SL339P-201ENST00000580597 296 ntBASIC7□□□□□ -1.29
CNGA1P29973 AC008507.2-201ENST00000588402 1176 ntBASIC7□□□□□ -1.29
CNGA1P29973 AL008723.3-201ENST00000608926 449 ntBASIC7□□□□□ -1.29
CNGA1P29973 SDR42E1P1-201ENST00000611327 477 ntBASIC7□□□□□ -1.29
CNGA1P29973 AC008147.4-201ENST00000617570 1204 ntBASIC7□□□□□ -1.29
CNGA1P29973 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CNGA1P29973 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7□□□□□ -1.29
CNGA1P29973 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7□□□□□ -1.29
CNGA1P29973 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7□□□□□ -1.29
CNGA1P29973 WDR95P-201ENST00000425638 1542 ntBASIC7□□□□□ -1.29
CNGA1P29973 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
CNGA1P29973 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
CNGA1P29973 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7□□□□□ -1.29
CNGA1P29973 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
CNGA1P29973 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7□□□□□ -1.29
CNGA1P29973 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CNGA1P29973 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CNGA1P29973 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CNGA1P29973 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.99□□□□□ -1.29
CNGA1P29973 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.99□□□□□ -1.29
CNGA1P29973 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
CNGA1P29973 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CNGA1P29973 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.99□□□□□ -1.29
CNGA1P29973 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.99□□□□□ -1.29
CNGA1P29973 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CNGA1P29973 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CNGA1P29973 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CNGA1P29973 AC137056.2-201ENST00000624055 1958 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 HSPD1P14-201ENST00000432666 1618 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CNGA1P29973 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CNGA1P29973 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CNGA1P29973 RNU6-481P-201ENST00000384194 107 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 MT-TP-201ENST00000387461 68 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 AL355615.1-201ENST00000406187 641 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 XKRYP4-201ENST00000414395 483 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.99□□□□□ -1.29
CNGA1P29973 MTCO1P43-201ENST00000431831 488 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 AC023512.1-201ENST00000444513 499 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 AC044797.1-201ENST00000445744 679 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.99□□□□□ -1.29
CNGA1P29973 MORF4-201ENST00000447135 971 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 XKRYP5-201ENST00000449659 483 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 HMGB1P5-202ENST00000451497 985 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 CALM1P2-201ENST00000452941 448 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 AC079080.1-201ENST00000479841 822 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 RPL21P47-201ENST00000483696 477 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 AC124945.1-201ENST00000485133 188 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 RN7SL423P-201ENST00000486202 304 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.99□□□□□ -1.29
CNGA1P29973 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.99□□□□□ -1.29
CNGA1P29973 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.99□□□□□ -1.29
CNGA1P29973 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.99□□□□□ -1.29
CNGA1P29973 KCTD9P4-201ENST00000526766 1166 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.99□□□□□ -1.29
CNGA1P29973 AP000916.1-201ENST00000533869 835 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.99□□□□□ -1.29
CNGA1P29973 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.99□□□□□ -1.29
CNGA1P29973 AC087888.1-201ENST00000550884 1254 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.99□□□□□ -1.29
CNGA1P29973 AC022404.1-201ENST00000555320 273 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.99□□□□□ -1.29
CNGA1P29973 AC106734.1-201ENST00000568646 663 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.99□□□□□ -1.29
CNGA1P29973 AC005244.1-201ENST00000582566 339 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 AC067852.5-201ENST00000589299 310 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.99□□□□□ -1.29
CNGA1P29973 AL591167.1-201ENST00000607321 456 ntBASIC6.99□□□□□ -1.29
CNGA1P29973 AC112503.1-201ENST00000608436 391 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms