RNA–Protein interactions for RNA: ENST00000519506.1

LINC01609-201, Transcript of long intergenic non-protein coding RNA 1609, humanhuman

TSL 3 BASIC

Gene LINC01609, Length 424 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01609-201ENST00000519506 AEBP2Q6ZN18 517 aaPredicted RBP21.44■■□□□ 1.02
LINC01609-201ENST00000519506 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
LINC01609-201ENST00000519506 PHF23Q9BUL5 403 aaPredicted RBP18.85■□□□□ 0.61
LINC01609-201ENST00000519506 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
LINC01609-201ENST00000519506 PLPPR3Q6T4P5 718 aa17.65■□□□□ 0.42
LINC01609-201ENST00000519506 FOXD1Q16676 465 aa16.8■□□□□ 0.28
LINC01609-201ENST00000519506 ADRA2BP18089 450 aa16.53■□□□□ 0.24
LINC01609-201ENST00000519506 PPP6R1Q9UPN7 881 aa16.49■□□□□ 0.23
LINC01609-201ENST00000519506 PIAS4Q8N2W9 510 aaPredicted RBP15.99■□□□□ 0.15
LINC01609-201ENST00000519506 KCNA4P22459 653 aa15.7■□□□□ 0.1
LINC01609-201ENST00000519506 PPP4R3CPQ6ZMV5 832 aa15.59■□□□□ 0.09
LINC01609-201ENST00000519506 MSH5O43196 834 aa15.38■□□□□ 0.05
LINC01609-201ENST00000519506 NCBP3Q53F19 620 aaKnown RBP15.38■□□□□ 0.05
LINC01609-201ENST00000519506 SCAF1Q9H7N4 1312 aaKnown RBP15.23■□□□□ 0.03
LINC01609-201ENST00000519506 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
LINC01609-201ENST00000519506 SLC4A1APQ9BWU0 796 aaKnown RBP15.09■□□□□ 0.01
LINC01609-201ENST00000519506 CNKSR2Q8WXI2 1034 aa15.07■□□□□ 0
LINC01609-201ENST00000519506 NPM3O75607 178 aaKnown RBP15.06■□□□□ 0
LINC01609-201ENST00000519506 MAPK8IP2Q13387 824 aaPredicted RBP14.86□□□□□ -0.03
LINC01609-201ENST00000519506 CSRNP3Q8WYN3 585 aa14.74□□□□□ -0.05
LINC01609-201ENST00000519506 RNF216Q9NWF9 866 aaPredicted RBP14.65□□□□□ -0.06
LINC01609-201ENST00000519506 DMRT2Q9Y5R5 561 aa14.58□□□□□ -0.08
LINC01609-201ENST00000519506 POTEDQ86YR6 584 aa14.56□□□□□ -0.08
LINC01609-201ENST00000519506 DNAJC5BQ9UF47 199 aa14.54□□□□□ -0.08
LINC01609-201ENST00000519506 HOXD11P31277 338 aaPredicted RBP14.45□□□□□ -0.1
LINC01609-201ENST00000519506 ZBTB22O15209 634 aa14.41□□□□□ -0.1
LINC01609-201ENST00000519506 FOXD4L1Q9NU39 408 aa14.36□□□□□ -0.11
LINC01609-201ENST00000519506 SLC4A2P04920 1241 aa14.09□□□□□ -0.15
LINC01609-201ENST00000519506 DCAF8L1A6NGE4 600 aa14□□□□□ -0.17
LINC01609-201ENST00000519506 MYCNP04198 464 aaPredicted RBP13.95□□□□□ -0.18
LINC01609-201ENST00000519506 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.85□□□□□ -0.19
LINC01609-201ENST00000519506 ATXN8OSP0DMR3 200 aa13.84□□□□□ -0.19
LINC01609-201ENST00000519506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.68□□□□□ -0.22
LINC01609-201ENST00000519506 HNRNPUL2Q1KMD3 747 aaKnown RBP13.68□□□□□ -0.22
LINC01609-201ENST00000519506 SAMD1Q6SPF0 538 aaPredicted RBP13.63□□□□□ -0.23
LINC01609-201ENST00000519506 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
LINC01609-201ENST00000519506 ATF5Q9Y2D1 282 aaPredicted RBP13.47□□□□□ -0.25
LINC01609-201ENST00000519506 APLP2Q06481 763 aa13.46□□□□□ -0.25
LINC01609-201ENST00000519506 FKBP8Q14318 412 aa13.35□□□□□ -0.27
LINC01609-201ENST00000519506 ZNF219Q9P2Y4 722 aaPredicted RBP13.28□□□□□ -0.28
LINC01609-201ENST00000519506 RNF39Q9H2S5 420 aa13.17□□□□□ -0.3
LINC01609-201ENST00000519506 TRHP20396 242 aaPredicted RBP13.11□□□□□ -0.31
LINC01609-201ENST00000519506 C1QBPQ07021 282 aaKnown RBP13.09□□□□□ -0.31
LINC01609-201ENST00000519506 CAPN15O75808 1086 aa13.08□□□□□ -0.32
LINC01609-201ENST00000519506 SPINK5Q9NQ38 1064 aaPredicted RBP13.08□□□□□ -0.32
LINC01609-201ENST00000519506 FBLN2P98095 1184 aa13□□□□□ -0.33
LINC01609-201ENST00000519506 POLA2Q14181 598 aa12.99□□□□□ -0.33
LINC01609-201ENST00000519506 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
LINC01609-201ENST00000519506 SPDYE4A6NLX3 237 aa12.92□□□□□ -0.34
LINC01609-201ENST00000519506 CACNB1Q02641 598 aaPredicted RBP12.91□□□□□ -0.34
LINC01609-201ENST00000519506 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
LINC01609-201ENST00000519506 RTN4Q9NQC3 1192 aaKnown RBP12.89□□□□□ -0.35
LINC01609-201ENST00000519506 ZBTB12Q9Y330 459 aaPredicted RBP12.86□□□□□ -0.35
LINC01609-201ENST00000519506 ABCB7O75027 752 aa12.83□□□□□ -0.36
LINC01609-201ENST00000519506 FBXO3Q9UK99 471 aa12.81□□□□□ -0.36
LINC01609-201ENST00000519506 DSG3P32926 999 aa12.69□□□□□ -0.38
LINC01609-201ENST00000519506 PROM2Q8N271 834 aa12.69□□□□□ -0.38
LINC01609-201ENST00000519506 VASPP50552 380 aaPredicted RBP12.55□□□□□ -0.4
LINC01609-201ENST00000519506 ZNF692Q9BU19 519 aaPredicted RBP12.55□□□□□ -0.4
LINC01609-201ENST00000519506 SPDYE2BA6NHP3 402 aa12.51□□□□□ -0.41
LINC01609-201ENST00000519506 SPDYE6P0CI01 402 aa12.51□□□□□ -0.41
LINC01609-201ENST00000519506 SPDYE2Q495Y8 402 aa12.51□□□□□ -0.41
LINC01609-201ENST00000519506 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
LINC01609-201ENST00000519506 SLC24A1O60721 1099 aa12.43□□□□□ -0.42
LINC01609-201ENST00000519506 SSUH2Q9Y2M2 353 aa12.41□□□□□ -0.42
LINC01609-201ENST00000519506 IFNLR1Q8IU57 520 aaPredicted RBP12.4□□□□□ -0.42
LINC01609-201ENST00000519506 STAG3Q9UJ98 1225 aa12.39□□□□□ -0.43
LINC01609-201ENST00000519506 PABPN1Q86U42 306 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC01609-201ENST00000519506 KLHL34Q8N239 644 aa12.31□□□□□ -0.44
LINC01609-201ENST00000519506 PLCD3Q8N3E9 789 aa12.28□□□□□ -0.44
LINC01609-201ENST00000519506 MIER1Q8N108 512 aa12.24□□□□□ -0.45
LINC01609-201ENST00000519506 SPOCK2Q92563 424 aa12.23□□□□□ -0.45
LINC01609-201ENST00000519506 PLEKHG5O94827 1062 aa12.2□□□□□ -0.46
LINC01609-201ENST00000519506 DCAF8L2P0C7V8 631 aa12.16□□□□□ -0.46
LINC01609-201ENST00000519506 RBM42Q9BTD8 480 aaKnown RBP12.15□□□□□ -0.46
LINC01609-201ENST00000519506 PKD2Q13563 968 aa12.14□□□□□ -0.47
LINC01609-201ENST00000519506 ZBTB47Q9UFB7 747 aaPredicted RBP12.13□□□□□ -0.47
LINC01609-201ENST00000519506 AKT1S1Q96B36 256 aa12.07□□□□□ -0.48
LINC01609-201ENST00000519506 ECM2O94769 699 aaPredicted RBP12.06□□□□□ -0.48
LINC01609-201ENST00000519506 SPDYE1Q8NFV5 336 aaPredicted RBP12.05□□□□□ -0.48
LINC01609-201ENST00000519506 CIZ1Q9ULV3 898 aaPredicted RBP11.98□□□□□ -0.49
LINC01609-201ENST00000519506 CLEC11AQ9Y240 323 aa11.98□□□□□ -0.49
LINC01609-201ENST00000519506 PLCB2Q00722 1185 aa11.97□□□□□ -0.49
LINC01609-201ENST00000519506 PRR29P0C7W0 189 aa11.95□□□□□ -0.5
LINC01609-201ENST00000519506 REM2Q8IYK8 340 aaPredicted RBP11.94□□□□□ -0.5
LINC01609-201ENST00000519506 TRIM41Q8WV44 630 aa11.89□□□□□ -0.51
LINC01609-201ENST00000519506 RGL2O15211 777 aa11.87□□□□□ -0.51
LINC01609-201ENST00000519506 GSE1Q14687 1217 aa11.87□□□□□ -0.51
LINC01609-201ENST00000519506 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.86□□□□□ -0.51
LINC01609-201ENST00000519506 BBXQ8WY36 941 aaPredicted RBP11.84□□□□□ -0.51
LINC01609-201ENST00000519506 HAP1P54257 671 aaPredicted RBP11.83□□□□□ -0.52
LINC01609-201ENST00000519506 CREBZFQ9NS37 354 aa11.82□□□□□ -0.52
LINC01609-201ENST00000519506 DCAF8Q5TAQ9 597 aa11.81□□□□□ -0.52
LINC01609-201ENST00000519506 NUBP1P53384 320 aa11.8□□□□□ -0.52
LINC01609-201ENST00000519506 PITPNM1O00562 1244 aa11.78□□□□□ -0.52
LINC01609-201ENST00000519506 NPM1P06748 294 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC01609-201ENST00000519506 FAM212AQ96EL1 285 aa11.76□□□□□ -0.53
LINC01609-201ENST00000519506 CHGAP10645 457 aaKnown RBP11.74□□□□□ -0.53
LINC01609-201ENST00000519506 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
LINC01609-201ENST00000519506 PAXIP1Q6ZW49 1069 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms