RNA–Protein interactions for RNA: ENST00000519506.1

LINC01609-201, Transcript of long intergenic non-protein coding RNA 1609, humanhuman

TSL 3 BASIC

Gene LINC01609, Length 424 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01609-201ENST00000519506 AEBP2Q6ZN18 517 aaPredicted RBP21.44■■□□□ 1.02
LINC01609-201ENST00000519506 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
LINC01609-201ENST00000519506 PHF23Q9BUL5 403 aaPredicted RBP18.85■□□□□ 0.61
LINC01609-201ENST00000519506 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
LINC01609-201ENST00000519506 PLPPR3Q6T4P5 718 aa17.65■□□□□ 0.42
LINC01609-201ENST00000519506 FOXD1Q16676 465 aa16.8■□□□□ 0.28
LINC01609-201ENST00000519506 ADRA2BP18089 450 aa16.53■□□□□ 0.24
LINC01609-201ENST00000519506 PPP6R1Q9UPN7 881 aa16.49■□□□□ 0.23
LINC01609-201ENST00000519506 PIAS4Q8N2W9 510 aaPredicted RBP15.99■□□□□ 0.15
LINC01609-201ENST00000519506 KCNA4P22459 653 aa15.7■□□□□ 0.1
LINC01609-201ENST00000519506 PPP4R3CPQ6ZMV5 832 aa15.59■□□□□ 0.09
LINC01609-201ENST00000519506 MSH5O43196 834 aa15.38■□□□□ 0.05
LINC01609-201ENST00000519506 NCBP3Q53F19 620 aaKnown RBP15.38■□□□□ 0.05
LINC01609-201ENST00000519506 SCAF1Q9H7N4 1312 aaKnown RBP15.23■□□□□ 0.03
LINC01609-201ENST00000519506 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
LINC01609-201ENST00000519506 SLC4A1APQ9BWU0 796 aaKnown RBP15.09■□□□□ 0.01
LINC01609-201ENST00000519506 CNKSR2Q8WXI2 1034 aa15.07■□□□□ 0
LINC01609-201ENST00000519506 NPM3O75607 178 aaKnown RBP15.06■□□□□ 0
LINC01609-201ENST00000519506 MAPK8IP2Q13387 824 aaPredicted RBP14.86□□□□□ -0.03
LINC01609-201ENST00000519506 CSRNP3Q8WYN3 585 aa14.74□□□□□ -0.05
LINC01609-201ENST00000519506 RNF216Q9NWF9 866 aaPredicted RBP14.65□□□□□ -0.06
LINC01609-201ENST00000519506 DMRT2Q9Y5R5 561 aa14.58□□□□□ -0.08
LINC01609-201ENST00000519506 POTEDQ86YR6 584 aa14.56□□□□□ -0.08
LINC01609-201ENST00000519506 DNAJC5BQ9UF47 199 aa14.54□□□□□ -0.08
LINC01609-201ENST00000519506 HOXD11P31277 338 aaPredicted RBP14.45□□□□□ -0.1
LINC01609-201ENST00000519506 ZBTB22O15209 634 aa14.41□□□□□ -0.1
LINC01609-201ENST00000519506 FOXD4L1Q9NU39 408 aa14.36□□□□□ -0.11
LINC01609-201ENST00000519506 SLC4A2P04920 1241 aa14.09□□□□□ -0.15
LINC01609-201ENST00000519506 DCAF8L1A6NGE4 600 aa14□□□□□ -0.17
LINC01609-201ENST00000519506 MYCNP04198 464 aaPredicted RBP13.95□□□□□ -0.18
LINC01609-201ENST00000519506 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.85□□□□□ -0.19
LINC01609-201ENST00000519506 ATXN8OSP0DMR3 200 aa13.84□□□□□ -0.19
LINC01609-201ENST00000519506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.68□□□□□ -0.22
LINC01609-201ENST00000519506 HNRNPUL2Q1KMD3 747 aaKnown RBP13.68□□□□□ -0.22
LINC01609-201ENST00000519506 SAMD1Q6SPF0 538 aaPredicted RBP13.63□□□□□ -0.23
LINC01609-201ENST00000519506 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
LINC01609-201ENST00000519506 ATF5Q9Y2D1 282 aaPredicted RBP13.47□□□□□ -0.25
LINC01609-201ENST00000519506 APLP2Q06481 763 aa13.46□□□□□ -0.25
LINC01609-201ENST00000519506 FKBP8Q14318 412 aa13.35□□□□□ -0.27
LINC01609-201ENST00000519506 ZNF219Q9P2Y4 722 aaPredicted RBP13.28□□□□□ -0.28
LINC01609-201ENST00000519506 RNF39Q9H2S5 420 aa13.17□□□□□ -0.3
LINC01609-201ENST00000519506 TRHP20396 242 aaPredicted RBP13.11□□□□□ -0.31
LINC01609-201ENST00000519506 C1QBPQ07021 282 aaKnown RBP13.09□□□□□ -0.31
LINC01609-201ENST00000519506 CAPN15O75808 1086 aa13.08□□□□□ -0.32
LINC01609-201ENST00000519506 SPINK5Q9NQ38 1064 aaPredicted RBP13.08□□□□□ -0.32
LINC01609-201ENST00000519506 FBLN2P98095 1184 aa13□□□□□ -0.33
LINC01609-201ENST00000519506 POLA2Q14181 598 aa12.99□□□□□ -0.33
LINC01609-201ENST00000519506 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
LINC01609-201ENST00000519506 SPDYE4A6NLX3 237 aa12.92□□□□□ -0.34
LINC01609-201ENST00000519506 CACNB1Q02641 598 aaPredicted RBP12.91□□□□□ -0.34
LINC01609-201ENST00000519506 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
LINC01609-201ENST00000519506 RTN4Q9NQC3 1192 aaKnown RBP12.89□□□□□ -0.35
LINC01609-201ENST00000519506 ZBTB12Q9Y330 459 aaPredicted RBP12.86□□□□□ -0.35
LINC01609-201ENST00000519506 ABCB7O75027 752 aa12.83□□□□□ -0.36
LINC01609-201ENST00000519506 FBXO3Q9UK99 471 aa12.81□□□□□ -0.36
LINC01609-201ENST00000519506 DSG3P32926 999 aa12.69□□□□□ -0.38
LINC01609-201ENST00000519506 PROM2Q8N271 834 aa12.69□□□□□ -0.38
LINC01609-201ENST00000519506 VASPP50552 380 aaPredicted RBP12.55□□□□□ -0.4
LINC01609-201ENST00000519506 ZNF692Q9BU19 519 aaPredicted RBP12.55□□□□□ -0.4
LINC01609-201ENST00000519506 SPDYE2BA6NHP3 402 aa12.51□□□□□ -0.41
LINC01609-201ENST00000519506 SPDYE6P0CI01 402 aa12.51□□□□□ -0.41
LINC01609-201ENST00000519506 SPDYE2Q495Y8 402 aa12.51□□□□□ -0.41
LINC01609-201ENST00000519506 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
LINC01609-201ENST00000519506 SLC24A1O60721 1099 aa12.43□□□□□ -0.42
LINC01609-201ENST00000519506 SSUH2Q9Y2M2 353 aa12.41□□□□□ -0.42
LINC01609-201ENST00000519506 IFNLR1Q8IU57 520 aaPredicted RBP12.4□□□□□ -0.42
LINC01609-201ENST00000519506 STAG3Q9UJ98 1225 aa12.39□□□□□ -0.43
LINC01609-201ENST00000519506 PABPN1Q86U42 306 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC01609-201ENST00000519506 KLHL34Q8N239 644 aa12.31□□□□□ -0.44
LINC01609-201ENST00000519506 PLCD3Q8N3E9 789 aa12.28□□□□□ -0.44
LINC01609-201ENST00000519506 MIER1Q8N108 512 aa12.24□□□□□ -0.45
LINC01609-201ENST00000519506 SPOCK2Q92563 424 aa12.23□□□□□ -0.45
LINC01609-201ENST00000519506 PLEKHG5O94827 1062 aa12.2□□□□□ -0.46
LINC01609-201ENST00000519506 DCAF8L2P0C7V8 631 aa12.16□□□□□ -0.46
LINC01609-201ENST00000519506 RBM42Q9BTD8 480 aaKnown RBP12.15□□□□□ -0.46
LINC01609-201ENST00000519506 PKD2Q13563 968 aa12.14□□□□□ -0.47
LINC01609-201ENST00000519506 ZBTB47Q9UFB7 747 aaPredicted RBP12.13□□□□□ -0.47
LINC01609-201ENST00000519506 AKT1S1Q96B36 256 aa12.07□□□□□ -0.48
LINC01609-201ENST00000519506 ECM2O94769 699 aaPredicted RBP12.06□□□□□ -0.48
LINC01609-201ENST00000519506 SPDYE1Q8NFV5 336 aaPredicted RBP12.05□□□□□ -0.48
LINC01609-201ENST00000519506 CIZ1Q9ULV3 898 aaPredicted RBP11.98□□□□□ -0.49
LINC01609-201ENST00000519506 CLEC11AQ9Y240 323 aa11.98□□□□□ -0.49
LINC01609-201ENST00000519506 PLCB2Q00722 1185 aa11.97□□□□□ -0.49
LINC01609-201ENST00000519506 PRR29P0C7W0 189 aa11.95□□□□□ -0.5
LINC01609-201ENST00000519506 REM2Q8IYK8 340 aaPredicted RBP11.94□□□□□ -0.5
LINC01609-201ENST00000519506 TRIM41Q8WV44 630 aa11.89□□□□□ -0.51
LINC01609-201ENST00000519506 RGL2O15211 777 aa11.87□□□□□ -0.51
LINC01609-201ENST00000519506 GSE1Q14687 1217 aa11.87□□□□□ -0.51
LINC01609-201ENST00000519506 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.86□□□□□ -0.51
LINC01609-201ENST00000519506 BBXQ8WY36 941 aaPredicted RBP11.84□□□□□ -0.51
LINC01609-201ENST00000519506 HAP1P54257 671 aaPredicted RBP11.83□□□□□ -0.52
LINC01609-201ENST00000519506 CREBZFQ9NS37 354 aa11.82□□□□□ -0.52
LINC01609-201ENST00000519506 DCAF8Q5TAQ9 597 aa11.81□□□□□ -0.52
LINC01609-201ENST00000519506 NUBP1P53384 320 aa11.8□□□□□ -0.52
LINC01609-201ENST00000519506 PITPNM1O00562 1244 aa11.78□□□□□ -0.52
LINC01609-201ENST00000519506 NPM1P06748 294 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC01609-201ENST00000519506 FAM212AQ96EL1 285 aa11.76□□□□□ -0.53
LINC01609-201ENST00000519506 CHGAP10645 457 aaKnown RBP11.74□□□□□ -0.53
LINC01609-201ENST00000519506 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
LINC01609-201ENST00000519506 PAXIP1Q6ZW49 1069 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms