RNA–Protein interactions for RNA: ENST00000451497.1

HMGB1P5-202, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 985 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-202ENST00000451497 AEBP2Q6ZN18 517 aaPredicted RBP24.66■■□□□ 1.54
HMGB1P5-202ENST00000451497 CHIC1Q5VXU3 224 aa22.97■■□□□ 1.27
HMGB1P5-202ENST00000451497 SENP3Q9H4L4 574 aaPredicted RBP21.18■□□□□ 0.98
HMGB1P5-202ENST00000451497 POTEDQ86YR6 584 aa20.79■□□□□ 0.92
HMGB1P5-202ENST00000451497 PHF23Q9BUL5 403 aaPredicted RBP20.76■□□□□ 0.91
HMGB1P5-202ENST00000451497 FOXD1Q16676 465 aa19.93■□□□□ 0.78
HMGB1P5-202ENST00000451497 MSH5O43196 834 aa19.08■□□□□ 0.64
HMGB1P5-202ENST00000451497 PIAS4Q8N2W9 510 aaPredicted RBP18.34■□□□□ 0.53
HMGB1P5-202ENST00000451497 PPP6R1Q9UPN7 881 aa17.71■□□□□ 0.43
HMGB1P5-202ENST00000451497 ADRA2BP18089 450 aa17.6■□□□□ 0.41
HMGB1P5-202ENST00000451497 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
HMGB1P5-202ENST00000451497 PLPPR3Q6T4P5 718 aa17.14■□□□□ 0.33
HMGB1P5-202ENST00000451497 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
HMGB1P5-202ENST00000451497 MAPK8IP2Q13387 824 aaPredicted RBP16.55■□□□□ 0.24
HMGB1P5-202ENST00000451497 RNF39Q9H2S5 420 aa16.18■□□□□ 0.18
HMGB1P5-202ENST00000451497 DCAF8L1A6NGE4 600 aa16.09■□□□□ 0.17
HMGB1P5-202ENST00000451497 POTEHQ6S545 545 aa16.05■□□□□ 0.16
HMGB1P5-202ENST00000451497 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
HMGB1P5-202ENST00000451497 C1QBPQ07021 282 aaKnown RBP15.85■□□□□ 0.13
HMGB1P5-202ENST00000451497 HOXD11P31277 338 aaPredicted RBP15.48■□□□□ 0.07
HMGB1P5-202ENST00000451497 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
HMGB1P5-202ENST00000451497 RNF216Q9NWF9 866 aaPredicted RBP15.04■□□□□ -0
HMGB1P5-202ENST00000451497 PPP4R3CPQ6ZMV5 832 aa14.9□□□□□ -0.02
HMGB1P5-202ENST00000451497 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
HMGB1P5-202ENST00000451497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.82□□□□□ -0.04
HMGB1P5-202ENST00000451497 DSG3P32926 999 aa14.76□□□□□ -0.05
HMGB1P5-202ENST00000451497 CAPN15O75808 1086 aa14.59□□□□□ -0.07
HMGB1P5-202ENST00000451497 SPINK5Q9NQ38 1064 aaPredicted RBP14.56□□□□□ -0.08
HMGB1P5-202ENST00000451497 SP7Q8TDD2 431 aaPredicted RBP14.45□□□□□ -0.1
HMGB1P5-202ENST00000451497 NCBP3Q53F19 620 aaKnown RBP14.38□□□□□ -0.11
HMGB1P5-202ENST00000451497 U3KPZ7 1027 aaPredicted RBP14.35□□□□□ -0.11
HMGB1P5-202ENST00000451497 CHRDL2Q6WN34 429 aa14.3□□□□□ -0.12
HMGB1P5-202ENST00000451497 KCNA4P22459 653 aa14.25□□□□□ -0.13
HMGB1P5-202ENST00000451497 ABCB7O75027 752 aa14.17□□□□□ -0.14
HMGB1P5-202ENST00000451497 NPM3O75607 178 aaKnown RBP14.16□□□□□ -0.14
HMGB1P5-202ENST00000451497 EHMT2Q96KQ7 1210 aa14.14□□□□□ -0.15
HMGB1P5-202ENST00000451497 TRHP20396 242 aaPredicted RBP14.07□□□□□ -0.16
HMGB1P5-202ENST00000451497 RBM42Q9BTD8 480 aaKnown RBP14.07□□□□□ -0.16
HMGB1P5-202ENST00000451497 ZNF219Q9P2Y4 722 aaPredicted RBP13.91□□□□□ -0.18
HMGB1P5-202ENST00000451497 HAX1O00165 279 aa13.81□□□□□ -0.2
HMGB1P5-202ENST00000451497 PLSCR2Q9NRY7 297 aa13.81□□□□□ -0.2
HMGB1P5-202ENST00000451497 APLP2Q06481 763 aa13.74□□□□□ -0.21
HMGB1P5-202ENST00000451497 SLC4A1APQ9BWU0 796 aaKnown RBP13.74□□□□□ -0.21
HMGB1P5-202ENST00000451497 PIP4P2Q8N4L2 257 aa13.71□□□□□ -0.21
HMGB1P5-202ENST00000451497 CSRNP3Q8WYN3 585 aa13.58□□□□□ -0.24
HMGB1P5-202ENST00000451497 EVX2Q03828 476 aa13.56□□□□□ -0.24
HMGB1P5-202ENST00000451497 LHX8Q68G74 356 aa13.54□□□□□ -0.24
HMGB1P5-202ENST00000451497 SLC4A2P04920 1241 aa13.49□□□□□ -0.25
HMGB1P5-202ENST00000451497 AKT1S1Q96B36 256 aa13.49□□□□□ -0.25
HMGB1P5-202ENST00000451497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.44□□□□□ -0.26
HMGB1P5-202ENST00000451497 HNRNPUL2Q1KMD3 747 aaKnown RBP13.44□□□□□ -0.26
HMGB1P5-202ENST00000451497 REM2Q8IYK8 340 aaPredicted RBP13.41□□□□□ -0.26
HMGB1P5-202ENST00000451497 FXR2P51116 673 aaKnown RBP eCLIP13.38□□□□□ -0.27
HMGB1P5-202ENST00000451497 POLA2Q14181 598 aa13.37□□□□□ -0.27
HMGB1P5-202ENST00000451497 SAMD1Q6SPF0 538 aaPredicted RBP13.33□□□□□ -0.28
HMGB1P5-202ENST00000451497 PITPNM1O00562 1244 aa13.29□□□□□ -0.28
HMGB1P5-202ENST00000451497 GABBR2O75899 941 aa13.15□□□□□ -0.3
HMGB1P5-202ENST00000451497 MYCNP04198 464 aaPredicted RBP13.11□□□□□ -0.31
HMGB1P5-202ENST00000451497 ZBTB22O15209 634 aa13.07□□□□□ -0.32
HMGB1P5-202ENST00000451497 FOXD4L1Q9NU39 408 aa13.06□□□□□ -0.32
HMGB1P5-202ENST00000451497 OSCARQ8IYS5 282 aa13.03□□□□□ -0.32
HMGB1P5-202ENST00000451497 C19orf67A6NJJ6 358 aa13□□□□□ -0.33
HMGB1P5-202ENST00000451497 PRKAR2AP13861 404 aaKnown RBP12.94□□□□□ -0.34
HMGB1P5-202ENST00000451497 ZBTB12Q9Y330 459 aaPredicted RBP12.93□□□□□ -0.34
HMGB1P5-202ENST00000451497 POTEIP0CG38 1075 aa12.87□□□□□ -0.35
HMGB1P5-202ENST00000451497 POTEMA6NI47 508 aa12.84□□□□□ -0.35
HMGB1P5-202ENST00000451497 ATF5Q9Y2D1 282 aaPredicted RBP12.77□□□□□ -0.37
HMGB1P5-202ENST00000451497 POTEGQ6S5H5 508 aa12.76□□□□□ -0.37
HMGB1P5-202ENST00000451497 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
HMGB1P5-202ENST00000451497 CLEC11AQ9Y240 323 aa12.67□□□□□ -0.38
HMGB1P5-202ENST00000451497 OTUD5Q96G74 571 aa12.63□□□□□ -0.39
HMGB1P5-202ENST00000451497 PCDH10Q9P2E7 1040 aa12.59□□□□□ -0.39
HMGB1P5-202ENST00000451497 CHADLQ6NUI6 762 aa12.57□□□□□ -0.4
HMGB1P5-202ENST00000451497 SPDYE1Q8NFV5 336 aaPredicted RBP12.55□□□□□ -0.4
HMGB1P5-202ENST00000451497 DCBLD2Q96PD2 775 aa12.54□□□□□ -0.4
HMGB1P5-202ENST00000451497 SPDYE2BA6NHP3 402 aa12.45□□□□□ -0.42
HMGB1P5-202ENST00000451497 SPDYE6P0CI01 402 aa12.45□□□□□ -0.42
HMGB1P5-202ENST00000451497 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
HMGB1P5-202ENST00000451497 SPDYE2Q495Y8 402 aa12.45□□□□□ -0.42
HMGB1P5-202ENST00000451497 POTEB2H3BUK9 544 aa12.44□□□□□ -0.42
HMGB1P5-202ENST00000451497 CLCN6P51797 869 aa12.39□□□□□ -0.43
HMGB1P5-202ENST00000451497 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
HMGB1P5-202ENST00000451497 RTN4Q9NQC3 1192 aaKnown RBP12.32□□□□□ -0.44
HMGB1P5-202ENST00000451497 FKBP8Q14318 412 aa12.31□□□□□ -0.44
HMGB1P5-202ENST00000451497 SLC24A1O60721 1099 aa12.27□□□□□ -0.45
HMGB1P5-202ENST00000451497 FBLN2P98095 1184 aa12.26□□□□□ -0.45
HMGB1P5-202ENST00000451497 PRR29P0C7W0 189 aa12.24□□□□□ -0.45
HMGB1P5-202ENST00000451497 LCE2DQ5TA82 110 aaPredicted RBP12.24□□□□□ -0.45
HMGB1P5-202ENST00000451497 MKRN4PQ13434 485 aaPredicted RBP12.2□□□□□ -0.46
HMGB1P5-202ENST00000451497 FARP1Q9Y4F1 1045 aaPredicted RBP12.19□□□□□ -0.46
HMGB1P5-202ENST00000451497 FAM163AQ96GL9 167 aaPredicted RBP12.17□□□□□ -0.46
HMGB1P5-202ENST00000451497 GALR2O43603 387 aaPredicted RBP12.16□□□□□ -0.46
HMGB1P5-202ENST00000451497 ZNF579Q8NAF0 562 aaKnown RBP12.16□□□□□ -0.46
HMGB1P5-202ENST00000451497 ZNF692Q9BU19 519 aaPredicted RBP12.14□□□□□ -0.47
HMGB1P5-202ENST00000451497 SSUH2Q9Y2M2 353 aa12.14□□□□□ -0.47
HMGB1P5-202ENST00000451497 ZRANB1Q9UGI0 708 aa12.1□□□□□ -0.47
HMGB1P5-202ENST00000451497 POTEJP0CG39 1038 aa12.05□□□□□ -0.48
HMGB1P5-202ENST00000451497 PELP1Q8IZL8 1130 aaKnown RBP12.04□□□□□ -0.48
HMGB1P5-202ENST00000451497 CDAN1Q8IWY9 1227 aa12.03□□□□□ -0.48
HMGB1P5-202ENST00000451497 MAMSTRQ6ZN01 415 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms