RNA–Protein interactions for RNA: ENST00000507428.1

LINC02039-201, Transcript of long intergenic non-protein coding RNA 2039, humanhuman

TSL 4 BASIC

Gene LINC02039, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02039-201ENST00000507428 AEBP2Q6ZN18 517 aaPredicted RBP30.37■■■□□ 2.45
LINC02039-201ENST00000507428 CHIC1Q5VXU3 224 aa28.65■■■□□ 2.18
LINC02039-201ENST00000507428 SENP3Q9H4L4 574 aaPredicted RBP25.91■■□□□ 1.74
LINC02039-201ENST00000507428 PHF23Q9BUL5 403 aaPredicted RBP25.58■■□□□ 1.69
LINC02039-201ENST00000507428 FOXD1Q16676 465 aa24.2■■□□□ 1.46
LINC02039-201ENST00000507428 PLPPR3Q6T4P5 718 aa22.78■■□□□ 1.24
LINC02039-201ENST00000507428 MSH5O43196 834 aa22.7■■□□□ 1.22
LINC02039-201ENST00000507428 PIAS4Q8N2W9 510 aaPredicted RBP22.51■■□□□ 1.19
LINC02039-201ENST00000507428 POTEDQ86YR6 584 aa22.5■■□□□ 1.19
LINC02039-201ENST00000507428 PPP6R1Q9UPN7 881 aa22.5■■□□□ 1.19
LINC02039-201ENST00000507428 ADRA2BP18089 450 aa22.37■■□□□ 1.17
LINC02039-201ENST00000507428 MAPK8IP2Q13387 824 aaPredicted RBP20.63■□□□□ 0.89
LINC02039-201ENST00000507428 DMRT2Q9Y5R5 561 aa20.53■□□□□ 0.88
LINC02039-201ENST00000507428 SCAF1Q9H7N4 1312 aaKnown RBP20.48■□□□□ 0.87
LINC02039-201ENST00000507428 PPP4R3CPQ6ZMV5 832 aa19.96■□□□□ 0.79
LINC02039-201ENST00000507428 HOXD11P31277 338 aaPredicted RBP19.73■□□□□ 0.75
LINC02039-201ENST00000507428 CNKSR2Q8WXI2 1034 aa19.63■□□□□ 0.73
LINC02039-201ENST00000507428 DCAF8L1A6NGE4 600 aa19.61■□□□□ 0.73
LINC02039-201ENST00000507428 CACNB1Q02641 598 aaPredicted RBP19.58■□□□□ 0.72
LINC02039-201ENST00000507428 RNF216Q9NWF9 866 aaPredicted RBP19.51■□□□□ 0.71
LINC02039-201ENST00000507428 RNF39Q9H2S5 420 aa19.37■□□□□ 0.69
LINC02039-201ENST00000507428 DNAJC5BQ9UF47 199 aa19.12■□□□□ 0.65
LINC02039-201ENST00000507428 NCBP3Q53F19 620 aaKnown RBP19.11■□□□□ 0.65
LINC02039-201ENST00000507428 C1QBPQ07021 282 aaKnown RBP19.08■□□□□ 0.64
LINC02039-201ENST00000507428 NPM3O75607 178 aaKnown RBP18.85■□□□□ 0.61
LINC02039-201ENST00000507428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.72■□□□□ 0.59
LINC02039-201ENST00000507428 U3KPZ7 1027 aaPredicted RBP18.34■□□□□ 0.53
LINC02039-201ENST00000507428 KCNA4P22459 653 aa18.3■□□□□ 0.52
LINC02039-201ENST00000507428 SPINK5Q9NQ38 1064 aaPredicted RBP18.13■□□□□ 0.49
LINC02039-201ENST00000507428 SLC4A2P04920 1241 aa18.08■□□□□ 0.48
LINC02039-201ENST00000507428 CAPN15O75808 1086 aa18.07■□□□□ 0.48
LINC02039-201ENST00000507428 DSG3P32926 999 aa18.07■□□□□ 0.48
LINC02039-201ENST00000507428 APLP2Q06481 763 aa17.78■□□□□ 0.44
LINC02039-201ENST00000507428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.74■□□□□ 0.43
LINC02039-201ENST00000507428 TRHP20396 242 aaPredicted RBP17.74■□□□□ 0.43
LINC02039-201ENST00000507428 HNRNPUL2Q1KMD3 747 aaKnown RBP17.74■□□□□ 0.43
LINC02039-201ENST00000507428 ZNF219Q9P2Y4 722 aaPredicted RBP17.71■□□□□ 0.43
LINC02039-201ENST00000507428 ABCB7O75027 752 aa17.63■□□□□ 0.41
LINC02039-201ENST00000507428 SAMD1Q6SPF0 538 aaPredicted RBP17.63■□□□□ 0.41
LINC02039-201ENST00000507428 POTEHQ6S545 545 aa17.58■□□□□ 0.4
LINC02039-201ENST00000507428 MYCNP04198 464 aaPredicted RBP17.41■□□□□ 0.38
LINC02039-201ENST00000507428 POLA2Q14181 598 aa17.26■□□□□ 0.35
LINC02039-201ENST00000507428 RBM42Q9BTD8 480 aaKnown RBP17.22■□□□□ 0.35
LINC02039-201ENST00000507428 SLC4A1APQ9BWU0 796 aaKnown RBP17.21■□□□□ 0.35
LINC02039-201ENST00000507428 FOXD4L1Q9NU39 408 aa17.13■□□□□ 0.33
LINC02039-201ENST00000507428 ATF5Q9Y2D1 282 aaPredicted RBP17.06■□□□□ 0.32
LINC02039-201ENST00000507428 CHRDL2Q6WN34 429 aa16.92■□□□□ 0.3
LINC02039-201ENST00000507428 ZBTB12Q9Y330 459 aaPredicted RBP16.86■□□□□ 0.29
LINC02039-201ENST00000507428 ZBTB22O15209 634 aa16.83■□□□□ 0.28
LINC02039-201ENST00000507428 AKT1S1Q96B36 256 aa16.81■□□□□ 0.28
LINC02039-201ENST00000507428 OSCARQ8IYS5 282 aa16.67■□□□□ 0.26
LINC02039-201ENST00000507428 ATXN8OSP0DMR3 200 aa16.66■□□□□ 0.26
LINC02039-201ENST00000507428 REM2Q8IYK8 340 aaPredicted RBP16.65■□□□□ 0.26
LINC02039-201ENST00000507428 PIP4P2Q8N4L2 257 aa16.49■□□□□ 0.23
LINC02039-201ENST00000507428 PITPNM1O00562 1244 aa16.44■□□□□ 0.22
LINC02039-201ENST00000507428 FXR2P51116 673 aaKnown RBP eCLIP16.39■□□□□ 0.21
LINC02039-201ENST00000507428 SP7Q8TDD2 431 aaPredicted RBP16.39■□□□□ 0.21
LINC02039-201ENST00000507428 FBLN2P98095 1184 aa16.36■□□□□ 0.21
LINC02039-201ENST00000507428 SPDYE2BA6NHP3 402 aa16.34■□□□□ 0.21
LINC02039-201ENST00000507428 SPDYE6P0CI01 402 aa16.34■□□□□ 0.21
LINC02039-201ENST00000507428 SPDYE2Q495Y8 402 aa16.34■□□□□ 0.21
LINC02039-201ENST00000507428 MKRN4PQ13434 485 aaPredicted RBP16.27■□□□□ 0.2
LINC02039-201ENST00000507428 HAX1O00165 279 aa16.22■□□□□ 0.19
LINC02039-201ENST00000507428 ZNF692Q9BU19 519 aaPredicted RBP16.12■□□□□ 0.17
LINC02039-201ENST00000507428 SSUH2Q9Y2M2 353 aa16.12■□□□□ 0.17
LINC02039-201ENST00000507428 SPDYE1Q8NFV5 336 aaPredicted RBP16.1■□□□□ 0.17
LINC02039-201ENST00000507428 EVX2Q03828 476 aa16.06■□□□□ 0.16
LINC02039-201ENST00000507428 CLEC11AQ9Y240 323 aa16.06■□□□□ 0.16
LINC02039-201ENST00000507428 PRKAR2AP13861 404 aaKnown RBP16.02■□□□□ 0.16
LINC02039-201ENST00000507428 CSRNP3Q8WYN3 585 aa15.9■□□□□ 0.14
LINC02039-201ENST00000507428 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
LINC02039-201ENST00000507428 C19orf67A6NJJ6 358 aa15.86■□□□□ 0.13
LINC02039-201ENST00000507428 PRR29P0C7W0 189 aa15.8■□□□□ 0.12
LINC02039-201ENST00000507428 CHADLQ6NUI6 762 aa15.79■□□□□ 0.12
LINC02039-201ENST00000507428 GABBR2O75899 941 aa15.68■□□□□ 0.1
LINC02039-201ENST00000507428 FARP1Q9Y4F1 1045 aaPredicted RBP15.57■□□□□ 0.08
LINC02039-201ENST00000507428 CD44P16070 742 aaKnown RBP15.48■□□□□ 0.07
LINC02039-201ENST00000507428 EHMT2Q96KQ7 1210 aa15.48■□□□□ 0.07
LINC02039-201ENST00000507428 STAG3Q9UJ98 1225 aa15.41■□□□□ 0.06
LINC02039-201ENST00000507428 CLCN6P51797 869 aa15.39■□□□□ 0.05
LINC02039-201ENST00000507428 LHX8Q68G74 356 aa15.38■□□□□ 0.05
LINC02039-201ENST00000507428 CREBZFQ9NS37 354 aa15.38■□□□□ 0.05
LINC02039-201ENST00000507428 SPDYE4A6NLX3 237 aa15.37■□□□□ 0.05
LINC02039-201ENST00000507428 POTEIP0CG38 1075 aa15.36■□□□□ 0.05
LINC02039-201ENST00000507428 ZNF579Q8NAF0 562 aaKnown RBP15.26■□□□□ 0.03
LINC02039-201ENST00000507428 ZRANB1Q9UGI0 708 aa15.24■□□□□ 0.03
LINC02039-201ENST00000507428 DCBLD2Q96PD2 775 aa15.17■□□□□ 0.02
LINC02039-201ENST00000507428 MNX1P50219 401 aaPredicted RBP15.12■□□□□ 0.01
LINC02039-201ENST00000507428 GALR2O43603 387 aaPredicted RBP15.09■□□□□ 0.01
LINC02039-201ENST00000507428 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
LINC02039-201ENST00000507428 PAK3O75914 559 aaPredicted RBP15.05■□□□□ -0
LINC02039-201ENST00000507428 PROM2Q8N271 834 aa15.02■□□□□ -0
LINC02039-201ENST00000507428 PHF12Q96QT6 1004 aa15□□□□□ -0.01
LINC02039-201ENST00000507428 POTEB2H3BUK9 544 aa14.85□□□□□ -0.03
LINC02039-201ENST00000507428 PELP1Q8IZL8 1130 aaKnown RBP14.85□□□□□ -0.03
LINC02039-201ENST00000507428 OTUD5Q96G74 571 aa14.82□□□□□ -0.04
LINC02039-201ENST00000507428 MS4A3Q96HJ5 214 aa14.8□□□□□ -0.04
LINC02039-201ENST00000507428 ASTLQ6HA08 431 aaPredicted RBP14.78□□□□□ -0.04
LINC02039-201ENST00000507428 TSPYL2Q9H2G4 693 aaPredicted RBP14.77□□□□□ -0.05
LINC02039-201ENST00000507428 CCDC61Q9Y6R9 512 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms