RNA–Protein interactions for RNA: ENST00000427439.1

LINC01222-201, Transcript of long intergenic non-protein coding RNA 1222, humanhuman

TSL 2 BASIC

Gene LINC01222, Length 1,785 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01222-201ENST00000427439 AEBP2Q6ZN18 517 aaPredicted RBP17.81■□□□□ 0.44
LINC01222-201ENST00000427439 POTEDQ86YR6 584 aa17.18■□□□□ 0.34
LINC01222-201ENST00000427439 CHIC1Q5VXU3 224 aa17.17■□□□□ 0.34
LINC01222-201ENST00000427439 SENP3Q9H4L4 574 aaPredicted RBP15.29■□□□□ 0.04
LINC01222-201ENST00000427439 PHF23Q9BUL5 403 aaPredicted RBP15.06■□□□□ 0
LINC01222-201ENST00000427439 FOXD1Q16676 465 aa14.15□□□□□ -0.14
LINC01222-201ENST00000427439 MSH5O43196 834 aa13.91□□□□□ -0.18
LINC01222-201ENST00000427439 PLPPR3Q6T4P5 718 aa13.85□□□□□ -0.19
LINC01222-201ENST00000427439 PPP6R1Q9UPN7 881 aa13.32□□□□□ -0.28
LINC01222-201ENST00000427439 ADRA2BP18089 450 aa13.31□□□□□ -0.28
LINC01222-201ENST00000427439 PIAS4Q8N2W9 510 aaPredicted RBP13.31□□□□□ -0.28
LINC01222-201ENST00000427439 CACNB1Q02641 598 aaPredicted RBP13.16□□□□□ -0.3
LINC01222-201ENST00000427439 EHMT2Q96KQ7 1210 aa13.14□□□□□ -0.31
LINC01222-201ENST00000427439 POTEHQ6S545 545 aa13.05□□□□□ -0.32
LINC01222-201ENST00000427439 KCNA4P22459 653 aa12.87□□□□□ -0.35
LINC01222-201ENST00000427439 CSRNP3Q8WYN3 585 aa12.55□□□□□ -0.4
LINC01222-201ENST00000427439 SLC4A1APQ9BWU0 796 aaKnown RBP12.47□□□□□ -0.41
LINC01222-201ENST00000427439 SCAF1Q9H7N4 1312 aaKnown RBP12.32□□□□□ -0.44
LINC01222-201ENST00000427439 SLC24A1O60721 1099 aa12.27□□□□□ -0.45
LINC01222-201ENST00000427439 NCBP3Q53F19 620 aaKnown RBP12.17□□□□□ -0.46
LINC01222-201ENST00000427439 PPP4R3CPQ6ZMV5 832 aa12.15□□□□□ -0.46
LINC01222-201ENST00000427439 MAPK8IP2Q13387 824 aaPredicted RBP12.15□□□□□ -0.46
LINC01222-201ENST00000427439 DMRT2Q9Y5R5 561 aa12.13□□□□□ -0.47
LINC01222-201ENST00000427439 AMER1Q5JTC6 1135 aaPredicted RBP11.95□□□□□ -0.5
LINC01222-201ENST00000427439 NPM3O75607 178 aaKnown RBP11.9□□□□□ -0.5
LINC01222-201ENST00000427439 CNKSR2Q8WXI2 1034 aa11.89□□□□□ -0.51
LINC01222-201ENST00000427439 RTN4Q9NQC3 1192 aaKnown RBP11.88□□□□□ -0.51
LINC01222-201ENST00000427439 ZBTB22O15209 634 aa11.82□□□□□ -0.52
LINC01222-201ENST00000427439 HOXD11P31277 338 aaPredicted RBP11.75□□□□□ -0.53
LINC01222-201ENST00000427439 RNF216Q9NWF9 866 aaPredicted RBP11.73□□□□□ -0.53
LINC01222-201ENST00000427439 DCAF8L1A6NGE4 600 aa11.62□□□□□ -0.55
LINC01222-201ENST00000427439 FOXD4L1Q9NU39 408 aa11.62□□□□□ -0.55
LINC01222-201ENST00000427439 PLSCR2Q9NRY7 297 aa11.6□□□□□ -0.55
LINC01222-201ENST00000427439 RNF39Q9H2S5 420 aa11.55□□□□□ -0.56
LINC01222-201ENST00000427439 DNAJC5BQ9UF47 199 aa11.43□□□□□ -0.58
LINC01222-201ENST00000427439 C1QBPQ07021 282 aaKnown RBP11.36□□□□□ -0.59
LINC01222-201ENST00000427439 FKBP8Q14318 412 aa11.31□□□□□ -0.6
LINC01222-201ENST00000427439 SP7Q8TDD2 431 aaPredicted RBP11.22□□□□□ -0.61
LINC01222-201ENST00000427439 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.21□□□□□ -0.61
LINC01222-201ENST00000427439 ATXN8OSP0DMR3 200 aa11.17□□□□□ -0.62
LINC01222-201ENST00000427439 MYCNP04198 464 aaPredicted RBP11.01□□□□□ -0.65
LINC01222-201ENST00000427439 SLC4A2P04920 1241 aa10.99□□□□□ -0.65
LINC01222-201ENST00000427439 U3KPZ7 1027 aaPredicted RBP10.95□□□□□ -0.66
LINC01222-201ENST00000427439 PLCB2Q00722 1185 aa10.95□□□□□ -0.66
LINC01222-201ENST00000427439 BCANQ96GW7 911 aa10.88□□□□□ -0.67
LINC01222-201ENST00000427439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.82□□□□□ -0.68
LINC01222-201ENST00000427439 HAP1P54257 671 aaPredicted RBP10.82□□□□□ -0.68
LINC01222-201ENST00000427439 HNRNPUL2Q1KMD3 747 aaKnown RBP10.82□□□□□ -0.68
LINC01222-201ENST00000427439 APLP2Q06481 763 aa10.82□□□□□ -0.68
LINC01222-201ENST00000427439 PRKCSHP14314 528 aaPredicted RBP10.75□□□□□ -0.69
LINC01222-201ENST00000427439 CAPN15O75808 1086 aa10.75□□□□□ -0.69
LINC01222-201ENST00000427439 SAMD1Q6SPF0 538 aaPredicted RBP10.74□□□□□ -0.69
LINC01222-201ENST00000427439 TAOK2Q9UL54 1235 aa10.73□□□□□ -0.69
LINC01222-201ENST00000427439 FBXO3Q9UK99 471 aa10.72□□□□□ -0.69
LINC01222-201ENST00000427439 SPINK5Q9NQ38 1064 aaPredicted RBP10.72□□□□□ -0.69
LINC01222-201ENST00000427439 VSIG10Q8N0Z9 540 aa10.7□□□□□ -0.7
LINC01222-201ENST00000427439 ZNF219Q9P2Y4 722 aaPredicted RBP10.66□□□□□ -0.7
LINC01222-201ENST00000427439 DCAF8L2P0C7V8 631 aa10.65□□□□□ -0.71
LINC01222-201ENST00000427439 DSG3P32926 999 aa10.62□□□□□ -0.71
LINC01222-201ENST00000427439 TRHP20396 242 aaPredicted RBP10.6□□□□□ -0.71
LINC01222-201ENST00000427439 ATF5Q9Y2D1 282 aaPredicted RBP10.59□□□□□ -0.71
LINC01222-201ENST00000427439 TPRNQ4KMQ1 711 aa10.56□□□□□ -0.72
LINC01222-201ENST00000427439 VASPP50552 380 aaPredicted RBP10.49□□□□□ -0.73
LINC01222-201ENST00000427439 ABCB7O75027 752 aa10.47□□□□□ -0.73
LINC01222-201ENST00000427439 LHX8Q68G74 356 aa10.47□□□□□ -0.73
LINC01222-201ENST00000427439 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.47□□□□□ -0.73
LINC01222-201ENST00000427439 SPDYE4A6NLX3 237 aa10.44□□□□□ -0.74
LINC01222-201ENST00000427439 IFNLR1Q8IU57 520 aaPredicted RBP10.4□□□□□ -0.74
LINC01222-201ENST00000427439 BBXQ8WY36 941 aaPredicted RBP10.4□□□□□ -0.74
LINC01222-201ENST00000427439 KDM2AQ9Y2K7 1162 aa10.4□□□□□ -0.74
LINC01222-201ENST00000427439 PKD2Q13563 968 aa10.39□□□□□ -0.75
LINC01222-201ENST00000427439 PROM2Q8N271 834 aa10.37□□□□□ -0.75
LINC01222-201ENST00000427439 POLA2Q14181 598 aa10.36□□□□□ -0.75
LINC01222-201ENST00000427439 PAXIP1Q6ZW49 1069 aaPredicted RBP10.34□□□□□ -0.75
LINC01222-201ENST00000427439 FBLN2P98095 1184 aa10.33□□□□□ -0.76
LINC01222-201ENST00000427439 CHRDL2Q6WN34 429 aa10.31□□□□□ -0.76
LINC01222-201ENST00000427439 CFAP44Q96MT7 982 aa10.31□□□□□ -0.76
LINC01222-201ENST00000427439 ZBTB12Q9Y330 459 aaPredicted RBP10.26□□□□□ -0.77
LINC01222-201ENST00000427439 ERICH6Q7L0X2 663 aa10.24□□□□□ -0.77
LINC01222-201ENST00000427439 ECM2O94769 699 aaPredicted RBP10.22□□□□□ -0.77
LINC01222-201ENST00000427439 SPRYD3Q8NCJ5 442 aa10.22□□□□□ -0.77
LINC01222-201ENST00000427439 ARXQ96QS3 562 aa10.22□□□□□ -0.77
LINC01222-201ENST00000427439 RBM42Q9BTD8 480 aaKnown RBP10.22□□□□□ -0.77
LINC01222-201ENST00000427439 DAXXQ9UER7 740 aaPredicted RBP10.22□□□□□ -0.77
LINC01222-201ENST00000427439 TIMELESSQ9UNS1 1208 aa10.22□□□□□ -0.77
LINC01222-201ENST00000427439 TULP1O00294 542 aaPredicted RBP10.21□□□□□ -0.78
LINC01222-201ENST00000427439 NPM1P06748 294 aaKnown RBP eCLIP10.21□□□□□ -0.78
LINC01222-201ENST00000427439 NBR1Q14596 966 aa10.18□□□□□ -0.78
LINC01222-201ENST00000427439 PCDH10Q9P2E7 1040 aa10.18□□□□□ -0.78
LINC01222-201ENST00000427439 MKRN4PQ13434 485 aaPredicted RBP10.17□□□□□ -0.78
LINC01222-201ENST00000427439 SPOCK2Q92563 424 aa10.17□□□□□ -0.78
LINC01222-201ENST00000427439 GTF3C3Q9Y5Q9 886 aa10.17□□□□□ -0.78
LINC01222-201ENST00000427439 TSHZ2Q9NRE2 1034 aa10.16□□□□□ -0.78
LINC01222-201ENST00000427439 KLHL34Q8N239 644 aa10.16□□□□□ -0.78
LINC01222-201ENST00000427439 RGL2O15211 777 aa10.04□□□□□ -0.8
LINC01222-201ENST00000427439 DNAJC5Q9H3Z4 198 aa10.03□□□□□ -0.8
LINC01222-201ENST00000427439 OSCARQ8IYS5 282 aa10.01□□□□□ -0.81
LINC01222-201ENST00000427439 CHGAP10645 457 aaKnown RBP9.99□□□□□ -0.81
LINC01222-201ENST00000427439 AKT1S1Q96B36 256 aa9.98□□□□□ -0.81
LINC01222-201ENST00000427439 HAX1O00165 279 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms