Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.48■■□□□ 1.35
DDX49Q9Y6V7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
DDX49Q9Y6V7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.48■■□□□ 1.35
DDX49Q9Y6V7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC23.48■■□□□ 1.35
DDX49Q9Y6V7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
DDX49Q9Y6V7 KRT18P68-201ENST00000392293 1000 ntBASIC23.48■■□□□ 1.35
DDX49Q9Y6V7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
DDX49Q9Y6V7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.48■■□□□ 1.35
DDX49Q9Y6V7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
DDX49Q9Y6V7 AC233263.1-201ENST00000578059 224 ntBASIC23.48■■□□□ 1.35
DDX49Q9Y6V7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.48■■□□□ 1.35
DDX49Q9Y6V7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.48■■□□□ 1.35
DDX49Q9Y6V7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
DDX49Q9Y6V7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
DDX49Q9Y6V7 CYP21A1P-202ENST00000354927 1481 ntBASIC23.48■■□□□ 1.35
DDX49Q9Y6V7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
DDX49Q9Y6V7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC23.48■■□□□ 1.35
DDX49Q9Y6V7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
DDX49Q9Y6V7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 AC100791.3-201ENST00000617619 330 ntBASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX49Q9Y6V7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 AC142381.4-202ENST00000563973 229 ntBASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX49Q9Y6V7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
DDX49Q9Y6V7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.35
DDX49Q9Y6V7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
DDX49Q9Y6V7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC23.45■■□□□ 1.34
DDX49Q9Y6V7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
DDX49Q9Y6V7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.45■■□□□ 1.34
DDX49Q9Y6V7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
DDX49Q9Y6V7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.45■■□□□ 1.34
DDX49Q9Y6V7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
DDX49Q9Y6V7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
DDX49Q9Y6V7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
DDX49Q9Y6V7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC23.45■■□□□ 1.34
DDX49Q9Y6V7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.45■■□□□ 1.34
DDX49Q9Y6V7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.45■■□□□ 1.34
DDX49Q9Y6V7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
DDX49Q9Y6V7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC23.45■■□□□ 1.34
DDX49Q9Y6V7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
DDX49Q9Y6V7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC23.45■■□□□ 1.34
DDX49Q9Y6V7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
DDX49Q9Y6V7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
DDX49Q9Y6V7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
DDX49Q9Y6V7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.44■■□□□ 1.34
DDX49Q9Y6V7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.44■■□□□ 1.34
DDX49Q9Y6V7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
DDX49Q9Y6V7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
DDX49Q9Y6V7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms